DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jumu and foxd4l1.1

DIOPT Version :9

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001016928.1 Gene:foxd4l1.1 / 549682 XenbaseID:XB-GENE-479247 Length:352 Species:Xenopus tropicalis


Alignment Length:356 Identity:86/356 - (24%)
Similarity:130/356 - (36%) Gaps:92/356 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 PHHQMQSNYSLGSPSSLSSSSASSPLGNVSNLVNIANNNTSGAGSG------LVKPLQQKVKLPP 404
            |.|....:..:.|||.||.:.:.|              ::||...|      ...|...|.|...
 Frog    45 PTHSEMGDSGILSPSKLSCTESES--------------DSSGESEGGTSKDSPATPSGGKAKRAL 95

  Fly   405 VGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCF 469
            |     ||.|||..||.:|:..|....|.:|.|..|:...|||:::....|:||:|||||||.||
 Frog    96 V-----KPPYSYIALITMAILQSPHKKLTLSGICDFISSKFPYYKDKFPAWQNSIRHNLSLNDCF 155

  Fly   470 EKIERPATNGNQRKGCRWAMNPDRINKMDEEVQKWSRKDPAAIRGAMVYPQHLESLERGEMKHGS 534
            .||  |...||..||..|.::|...:..|         :.:.:|....:.:|.:...:       
 Frog   156 IKI--PREPGNPGKGNYWTLDPASEDMFD---------NGSFLRRRKRFKRHQQEFFK------- 202

  Fly   535 ADSDVELDSQSEIEESSDLEEHE-FEDTMVDAMLVEE------------EDEEEDGDDDEQIIND 586
             |..|..:........|.::..: .:.|.|..|.:.|            :.:.:....|:.:...
 Frog   203 -DGLVMYNPLPYYRPYSTIQPQQVLQQTPVACMAIPENLTMPTHLSPYPDIKRKVPYPDQGVHRG 266

  Fly   587 FDAEDERHANGNQANNLPINHPLLGQKSNDFDIEVGDLYDAIDIEDDKESVRRIIS------NDQ 645
            |:|.|..            |||...|....|.||        :|....:......|      |..
 Frog   267 FEALDAD------------NHPNKSQSKCSFSIE--------NIMRKPKEPEPSFSTFNPHWNYN 311

  Fly   646 HIIE-----LNPADLNATDGYNQQPALKRAR 671
            |:::     |.||.||.:.|    |.|..|:
 Frog   312 HLLQRPNSCLLPAVLNLSTG----PLLSNAQ 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 Forkhead 411..499 CDD:278670 37/87 (43%)
foxd4l1.1NP_001016928.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..92 12/58 (21%)
Forkhead 97..183 CDD:278670 38/96 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.