DRSC/TRiP Functional Genomics Resources

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Protein Alignment jumu and foxd1

DIOPT Version :10

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_998078.2 Gene:foxd1 / 405849 ZFINID:ZDB-GENE-040426-2094 Length:343 Species:Danio rerio


Alignment Length:191 Identity:60/191 - (31%)
Similarity:77/191 - (40%) Gaps:42/191 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 MGLKREDSNKRGLQASTTPKSIASAANSPHH---------QMQSNYSL-GSPSSLSSSSASSPLG 372
            |.|..|.|:...|...|....:....:...|         ||.....| |||..:.:|.|..|  
Zfish     1 MTLSSEMSDASVLSEETDIDVVGEGDDGDGHTRSYVDEVAQMHDEILLNGSPPGVDASPARDP-- 63

  Fly   373 NVSNLVNIANNNTSGAGSGLVKPLQQKVKLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEI 437
                 ...|:.||      ||                 ||.|||..||.:|:..|....|.:|||
Zfish    64 -----YKPASKNT------LV-----------------KPPYSYIALITMAILQSPKKRLTLSEI 100

  Fly   438 YSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGCRWAMNPDRINKMD 498
            ..|:...|||:......|:||:|||||||.||.||  |...||..||..|.::|:..:..|
Zfish   101 CDFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKI--PREPGNPGKGNYWTLDPESADMFD 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 COG5025 <254..>523 CDD:227358 60/191 (31%)
FH_FOXN1-like 411..491 CDD:410804 37/79 (47%)
foxd1NP_998078.2 FH_FOXD1_D2-like 74..172 CDD:410820 39/88 (44%)

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