DRSC/TRiP Functional Genomics Resources

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Protein Alignment jumu and foxq1b

DIOPT Version :9

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_998072.1 Gene:foxq1b / 405843 ZFINID:ZDB-GENE-040426-2090 Length:283 Species:Danio rerio


Alignment Length:228 Identity:66/228 - (28%)
Similarity:101/228 - (44%) Gaps:46/228 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 SSASSPLGNVSNLVN--IANNNTSGAGS----GLVKPLQQKVKLPPVGSPFPKPAYSYSCLIALA 423
            ::.:|||.....|.:  ..:.|:.|.|:    |..||..::          |||.|||..|||:|
Zfish     3 ANVASPLSTEEELGSDGDCSANSPGPGAPVPDGKAKPYTRR----------PKPPYSYIALIAMA 57

  Fly   424 LKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKI----ERPATNGNQRKG 484
            :::|..|.|.::||..:|.:.||:|..:.:||:||||||||||.||.|:    .||....|.   
Zfish    58 IRDSNTGRLTLAEINEYLMKKFPFFRGSYTGWRNSVRHNLSLNDCFLKVLRDPSRPWGKDNY--- 119

  Fly   485 CRWAMNPDRINKMDEEVQKWSRKDPAAIRGAMVYPQHLESLERGEMK-HGSADSDVELDSQSEIE 548
              |.:||.......:.|.:..||                   |...| .|||:|...:.:.....
Zfish   120 --WMLNPHSEYTFADGVFRRRRK-------------------RISKKILGSAESPERVPADDSRL 163

  Fly   549 ESSDLEEHEFEDTM-VDAMLVEEEDEEEDGDDD 580
            .:.|....:|..:. :|::|.:.....|...||
Zfish   164 PARDESVSKFSSSFAIDSILSKPFMRREQSTDD 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 Forkhead 411..499 CDD:278670 39/91 (43%)
foxq1bNP_998072.1 FH 45..134 CDD:214627 39/93 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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