DRSC/TRiP Functional Genomics Resources

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Protein Alignment jumu and foxa1

DIOPT Version :10

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_989419.1 Gene:foxa1 / 395059 XenbaseID:XB-GENE-487352 Length:428 Species:Xenopus tropicalis


Alignment Length:338 Identity:87/338 - (25%)
Similarity:132/338 - (39%) Gaps:88/338 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 ELRKAQSS-PVPNSLEELGKGKGSTLLNASVGATNTIKLAPGIGGLTFANSAAYQKLKQTSLVKS 306
            :.::|.|| ||.|..:.|........:|....::|   :..|...:::|||.....|       |
 Frog    21 DTQEAYSSVPVSNMTQGLASMNTYMTMNPMSSSSN---MTAGSFNMSYANSGLGAGL-------S 75

  Fly   307 PGGIS-PGAGSNMGLKREDSNKRGLQASTTPKSIASAANSPHHQMQSNYSLGSPSSLSSSSASSP 370
            |.|:| .||||                       |||.|.....:.|..:..||||:::.||.. 
 Frog    76 PSGMSGMGAGS-----------------------ASAMNGMGSGVSSMGTALSPSSMNAMSAQQ- 116

  Fly   371 LGNVSNLVNIANNNTSGAGSGLVKPL---------QQKVKLPPVGSPFPKPAYSYSCLIALALKN 426
                   .:|.:.:.||...|: .|:         .:..|......|..||.|||..||.:|::.
 Frog   117 -------ASINSLSYSGMNPGM-SPMAYGPSNMNRTRDTKTFRRSYPHAKPPYSYISLITMAIQQ 173

  Fly   427 SRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIER-PATNGNQRKGCRWAMN 490
            :.:..|.:||||.::...|.|:......|:||:||:||.|.||.|:.| |...|   ||..|.::
 Frog   174 APSKMLTLSEIYQWIMDLFLYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPG---KGSYWTLH 235

  Fly   491 PDRINKMDEEVQKWSRKDPAAIRGAMVYPQHLESLERGEMKHGSAD--SDV-------------- 539
            ||..|..:              .|..:..|.....|:.:...||.|  .||              
 Frog   236 PDSGNMFE--------------NGCYLRRQKRFKCEKQQGGKGSQDGRKDVSGPSSPLHRVHGKS 286

  Fly   540 -ELDSQSEIEESS 551
             ::||.|.:...|
 Frog   287 SQMDSSSSMSNPS 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 COG5025 <254..>523 CDD:227358 72/279 (26%)
FH_FOXN1-like 411..491 CDD:410804 32/80 (40%)
foxa1NP_989419.1 Forkhead_N 17..157 CDD:369872 40/177 (23%)
FH_FOX 146..256 CDD:469596 39/126 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..337 10/43 (23%)
HNF_C 353..417 CDD:430552
Blue background indicates that the domain is not in the aligned region.

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