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Protein Alignment jumu and Foxc1
DIOPT Version :9
Sequence 1: | NP_524302.1 |
Gene: | jumu / 41265 |
FlyBaseID: | FBgn0015396 |
Length: | 719 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_599165.1 |
Gene: | Foxc1 / 364706 |
RGDID: | 1589718 |
Length: | 553 |
Species: | Rattus norvegicus |
Alignment Length: | 183 |
Identity: | 53/183 - (28%) |
Similarity: | 84/183 - (45%) |
Gaps: | 29/183 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 350 MQSNYSLGSPSSLSSSSASSPLGNVSNLVNIANNNTSGAGSGLVKPL---------------QQK 399
||:.||:.||:|| .....||...:....|.....|..:.:..|: ..:
Rat 1 MQARYSVSSPNSL---GVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGMAR 62
Fly 400 VKLPPVGSPFP----KPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVR 460
...|....|.| ||.|||..||.:|::|:....:.::.||.|:...||::.:...||:||:|
Rat 63 AYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIR 127
Fly 461 HNLSLNKCFEKIERPATNGNQRKGCRWAMNPDRINKMD-----EEVQKWSRKD 508
||||||:||.|: |..:....||..|.::||..|..: ...:::.:||
Rat 128 HNLSLNECFVKV--PRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKD 178
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
jumu | NP_524302.1 |
Forkhead |
411..499 |
CDD:278670 |
35/92 (38%) |
Foxc1 | NP_599165.1 |
FH |
78..166 |
CDD:214627 |
35/89 (39%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG2294 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1270467at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.820 |
|
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