DRSC/TRiP Functional Genomics Resources

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Protein Alignment jumu and Foxk1

DIOPT Version :10

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001032296.2 Gene:Foxk1 / 304298 RGDID:1309643 Length:719 Species:Rattus norvegicus


Alignment Length:436 Identity:104/436 - (23%)
Similarity:168/436 - (38%) Gaps:98/436 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 PLINSTSAGMFSPKKNKTASSTQGRSG--AVPSSPSAE--RDQHKSHLTFSPAQMKVSAGSMRRD 195
            |::.:.:|....|.........|...|  |:|:.|..|  .....:....:||.:..:|.|:|:.
  Rat    23 PVLCAAAAAAAFPATASPPPPAQPPPGPPALPAVPGPEPVPSTAATATATAPALVAAAAASVRQS 87

  Fly   196 ----------QVMAHIPKQISVVTGTGT---TAPATMATNSVLQRRNSSAVDAVRKDLVTELRKA 247
                      :....:.:|.||..|..:   :....|..:|.:.||:              |:.:
  Rat    88 PGPALARLEGREFEFLMRQPSVTIGRNSSQGSVDLNMGLSSFISRRH--------------LQLS 138

  Fly   248 QSSPVPNSLEELGKG----------KGSTLLNASVGATNTIKLAPGIGGLTFANSAAYQKLKQTS 302
            ...| ...|..|||.          :|:..|......|           ..|.::|.  |::.||
  Rat   139 FQEP-HFYLRCLGKNGVFVDGAFQRRGAPALQLPQQCT-----------FRFPSTAI--KIQFTS 189

  Fly   303 LV-KSPGGISPGAGSNMGLKREDSNKRGLQASTTPKSIASAANSPHHQMQSNYS-LGSPS---SL 362
            |. |.....||              .|.|....:|..|    :.|...::|..| :.||:   |:
  Rat   190 LYHKEEAPASP--------------LRPLYPQISPLKI----HIPEPDLRSLVSPIPSPTGTISV 236

  Fly   363 SSSSASSPLGNVSNLVNIANNNTSG---AGSGLVKPLQQKVKLPPVGSPFP----KPAYSYSCLI 420
            .:|..:||.|..|:......|.||.   |.....|...:: :....|...|    ||.|||:.||
  Rat   237 PNSCPASPRGAGSSSYRFVQNVTSDLQLAAEFAAKAASEQ-QADTSGGDSPKDESKPPYSYAQLI 300

  Fly   421 ALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNGNQRKGC 485
            ..|:.:::...|.:|.||:.:.:|:||:..|..||:||:|||||||:.|.|:  |.:.....||.
  Rat   301 VQAISSAQDRQLTLSGIYAHITKHYPYYRTADKGWQNSIRHNLSLNRYFIKV--PRSQEEPGKGS 363

  Fly   486 RWAMNPDRINKMDEEVQKWSRK----------DPAAIRGAMVYPQH 521
            .|.::|....|:.|:..:..|:          .|.:.|.|...|.|
  Rat   364 FWRIDPASEAKLVEQAFRKRRQRGVSCFRTPFGPLSSRSAPASPTH 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 COG5025 <254..>523 CDD:227358 80/300 (27%)
FH_FOXN1-like 411..491 CDD:410804 33/79 (42%)
Foxk1NP_001032296.2 FHA_FOXK1 89..191 CDD:438774 22/129 (17%)
FH_FOXK1 289..389 CDD:410828 37/101 (37%)

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