DRSC/TRiP Functional Genomics Resources

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Protein Alignment jumu and Foxd4

DIOPT Version :9

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:XP_001055972.2 Gene:Foxd4 / 252886 RGDID:621716 Length:432 Species:Rattus norvegicus


Alignment Length:146 Identity:49/146 - (33%)
Similarity:70/146 - (47%) Gaps:27/146 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 SLGSPSSLSSSSASS-PLGNVSNLVNIANNNTSGAGSGLVKPLQQKVKLP-------PVGSPFP- 410
            ||..|.:.:.:..|: ..|::||            .||.::    |.:.|       ....|.| 
  Rat    54 SLQRPGARTLARRSAWDCGDLSN------------SSGFLR----KFRAPRTRATTTTADGPQPA 102

  Fly   411 KPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERP 475
            ||.|||..||.:|:..|....|.:|.|.:|:...|||:......|:||:|||||||.||.||  |
  Rat   103 KPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKI--P 165

  Fly   476 ATNGNQRKGCRWAMNP 491
            ...|:..||..|:::|
  Rat   166 REPGHPGKGNYWSLDP 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 Forkhead 411..499 CDD:278670 36/81 (44%)
Foxd4XP_001055972.2 Forkhead 103..189 CDD:278670 36/81 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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