DRSC/TRiP Functional Genomics Resources

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Protein Alignment jumu and Foxj3

DIOPT Version :9

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001344106.1 Gene:Foxj3 / 230700 MGIID:2443432 Length:623 Species:Mus musculus


Alignment Length:328 Identity:85/328 - (25%)
Similarity:137/328 - (41%) Gaps:71/328 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 YSLGSPSSLS---SSSASSPLGNVSNLVNI----------ANNNTSGAG----SGLVKPL----Q 397
            |....||..|   :|...|.|.::..|..:          |..|..|.|    :.|:.|.    |
Mouse     4 YGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGISKKNALLDPNTTLDQ 68

  Fly   398 QKVKLPPVGSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHN 462
            ::|:....|    ||.|||:.||..|:.:|....:.:||||.::|.:|||:..|.||||||:|||
Mouse    69 EEVQQHKDG----KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHN 129

  Fly   463 LSLNKCFEKIERPATNGNQRKGCRWAM--NPDRINKMDEEVQKWSRKDPAAIRGAMVYPQHLESL 525
            |||||||.|:  |.:..:..||..||:  ||    |.|....:..::..:..|.:..|....:||
Mouse   130 LSLNKCFLKV--PRSKDDPGKGSYWAIDTNP----KEDTLPTRPKKRARSVERASTPYSIDSDSL 188

  Fly   526 ERGEMKHGSADSDVELDSQSEIEESSDLEEHEFEDTMVDAMLVEEEDEEEDGDDD--EQIINDFD 588
            ....:..|||...:.:::.:.            :.|:.:|        ::||.|.  ..:.|...
Mouse   189 GMECIISGSASPTLAINTVTN------------KVTLYNA--------DQDGSDSPRSSLNNSLS 233

  Fly   589 AEDERHANGNQANNL-----------PINHPLLGQKSNDFDIEVGD-----LYDAIDIEDDKESV 637
            .:.....|.|...::           |::.||..|:.......:.:     |:...:.||...|.
Mouse   234 DQSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDLSASF 298

  Fly   638 RRI 640
            |.:
Mouse   299 RSL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 Forkhead 411..499 CDD:278670 43/89 (48%)
Foxj3NP_001344106.1 COG5025 <54..347 CDD:227358 73/278 (26%)
Forkhead 78..155 CDD:365978 40/78 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..178 9/38 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 248..275 4/26 (15%)
PAT1 <311..>434 CDD:370676
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..451
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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