DRSC/TRiP Functional Genomics Resources

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Protein Alignment jumu and fkh-8

DIOPT Version :10

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001254107.1 Gene:fkh-8 / 174026 WormBaseID:WBGene00001440 Length:328 Species:Caenorhabditis elegans


Alignment Length:349 Identity:93/349 - (26%)
Similarity:141/349 - (40%) Gaps:109/349 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 SSLSSS-------SASSPLGNVSNLVNIANNNTSGAGSGLVKPLQQKVKLP-----PVGSPF--- 409
            |.||||       .|...|..|..:....|.|.  .||..|.||.....:|     ||....   
 Worm     2 SDLSSSLCQLNWLIAKGGLNTVQEIEVPENPNI--VGSVNVSPLVLSPTVPAETSKPVAPAHEGK 64

  Fly   410 --------PKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYF-ENAPSGWKNSVRHNLSL 465
                    .||.||||.||.||::::......::|||||:..:|.:: ||..|.||||:||||||
 Worm    65 RRRIFDGADKPPYSYSQLIRLAIEDTPDKKCTLAEIYSFIAHNFQFYRENRNSSWKNSIRHNLSL 129

  Fly   466 NKCFEKIERPATNGNQR----------------KGCRWAMNPDRINKMDEEVQKWSR-------- 506
            ||.|.:||:  |:|::|                ||     :|.|:|.:.|.:....:        
 Worm   130 NKQFSRIEK--TDGDRRGWWVCVDPPAKKPRILKG-----SPVRVNPIYEHLYHNKQDMPNFTPP 187

  Fly   507 -KDP--AAIRGAMVYPQHLESLERGEMKHGSADSDVELDSQ-----SEIEESSDLEEHEFEDTMV 563
             :||  :.|.|      ::..|...|::..:.....:|:|.     ::|.|.|.....:.:...:
 Worm   188 PEDPFLSEING------NVHELTEHEIRDLNLFESYDLNSSFRDVYNQIFEKSTSPNGKKQAAQI 246

  Fly   564 DAMLV-----------EEEDEEEDGDD-DEQIINDFDAEDE-----------RHANGN---QANN 602
            |.:.:           |:|.:|.|.|. .:.:.|.|.||.:           ||::.:   .|..
 Worm   247 DWLKISLEAAGLDYHDEQELQEVDTDKLKDYVYNGFPAECDSDVSTPRTDSGRHSSSDSVLSATL 311

  Fly   603 LPINHPLLGQKSNDFDIEVGDLYD 626
            .|:|        ||.|    |.||
 Worm   312 QPVN--------NDSD----DEYD 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 COG5025 <254..>523 CDD:227358 65/213 (31%)
FH_FOXN1-like 411..491 CDD:410804 39/96 (41%)
fkh-8NP_001254107.1 COG5025 30..>217 CDD:227358 59/201 (29%)
FH 74..156 CDD:214627 37/83 (45%)

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