DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jumu and Foxa1

DIOPT Version :10

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_032285.2 Gene:Foxa1 / 15375 MGIID:1347472 Length:468 Species:Mus musculus


Alignment Length:338 Identity:85/338 - (25%)
Similarity:131/338 - (38%) Gaps:90/338 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 ELRKAQSS-PVPNSLEELGKGKGSTLLNASVGATNTI-------------KLAPGIGGLTFANSA 293
            :.::|.|| ||.|             :|:.:|:.|::             .:.|....:::||:.
Mouse    21 DTQEAYSSVPVSN-------------MNSGLGSMNSMNTYMTMNTMTTSGNMTPASFNMSYANTG 72

  Fly   294 AYQKLKQTSLVKSPGGIS--PGAGSNMGLKREDSNKRGLQASTTPKSIASAANSPHHQMQSNYSL 356
            ....|       |||.::  |||.:........:....:..:.:|..:.|....|...|.   .|
Mouse    73 LGAGL-------SPGAVAGMPGASAGAMNSMTAAGVTAMGTALSPGGMGSMGAQPATSMN---GL 127

  Fly   357 GSPSSLSSSSASSPLGNV-SNLVNIANNNTSGAGSGLVKPLQQKVKLPPVGSPFPKPAYSYSCLI 420
            | |.:.:.:...||:... |||     ..:...|.|..|..::..       |..||.|||..||
Mouse   128 G-PYAAAMNPCMSPMAYAPSNL-----GRSRAGGGGDAKTFKRSY-------PHAKPPYSYISLI 179

  Fly   421 ALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIER-PATNGNQRKG 484
            .:|::.:.:..|.:||||.::...|||:......|:||:||:||.|.||.|:.| |...|   ||
Mouse   180 TMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPG---KG 241

  Fly   485 CRWAMNPDRINKMDE------------EVQKW---------------SRKDPAAIRGAMVYPQHL 522
            ..|.::||..|..:.            |.|..               |||||:....    |...
Mouse   242 SYWTLHPDSGNMFENGCYLRRQKRFKCEKQPGAGGGSGGGGSKGGPESRKDPSGPGN----PSAE 302

  Fly   523 ESLERGEMKHGSA 535
            ..|.||  .||.|
Mouse   303 SPLHRG--VHGKA 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 COG5025 <254..>523 CDD:227358 74/312 (24%)
FH_FOXN1-like 411..491 CDD:410804 33/80 (41%)
Foxa1NP_032285.2 Forkhead_N 17..169 CDD:369872 35/183 (19%)
FH_FOXA1 157..268 CDD:410812 39/120 (33%)
Essential for DNA binding 251..288 3/36 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..396 14/51 (27%)
HNF_C 393..457 CDD:430552
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.