DRSC/TRiP Functional Genomics Resources

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Protein Alignment jumu and Foxc2

DIOPT Version :9

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_038547.2 Gene:Foxc2 / 14234 MGIID:1347481 Length:494 Species:Mus musculus


Alignment Length:221 Identity:57/221 - (25%)
Similarity:99/221 - (44%) Gaps:34/221 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 MQSNYSLGSPSSL---------SSSSASSPLGNVSNLVNIANNNTSGAGSGLVKPLQQKVKLPPV 405
            ||:.||:..|::|         :...|:...|.:::.:.:.:.:....|:|:.:........|..
Mouse     1 MQARYSVSDPNALGVVPYLSEQNYYRAAGSYGGMASPMGVYSGHPEQYGAGMGRSYAPYHHQPAA 65

  Fly   406 GSPFPKPAYSYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFE 470
            .....||.|||..||.:|::|:....:.::.||.|:...||::.....||:||:|||||||:||.
Mouse    66 PKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 130

  Fly   471 KIERPATNGNQRKGCRWAMNPDRINKMD-----EEVQKWSRKDPAAIRGAMVYPQHLESLERGEM 530
            |:  |..:....||..|.::||..|..:     ...:::.:||         .|:..|  ||..:
Mouse   131 KV--PRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKD---------VPKDKE--ERAHL 182

  Fly   531 KH-------GSADSDVELDSQSEIEE 549
            |.       |:.......|...|.|:
Mouse   183 KEPPSTTAKGAPTGTPVADGPKEAEK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 Forkhead 411..499 CDD:278670 35/92 (38%)
Foxc2NP_038547.2 FH 71..159 CDD:214627 35/89 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 11/54 (20%)
EBP50_C 167..>257 CDD:286142 11/53 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..422
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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