DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jumu and Foxj1

DIOPT Version :9

Sequence 1:NP_524302.1 Gene:jumu / 41265 FlyBaseID:FBgn0015396 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_446284.2 Gene:Foxj1 / 116557 RGDID:621764 Length:421 Species:Rattus norvegicus


Alignment Length:373 Identity:88/373 - (23%)
Similarity:138/373 - (36%) Gaps:94/373 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 GISPG--AGSNMGLKREDSNKRGL--------------QASTTPKSIASAANSPH--HQMQSNYS 355
            |..||  ||...|::..|:....|              :|.|.|    .....||  ||:....:
  Rat    10 GAGPGEEAGPEGGMEEPDALDDSLTSLQWLQEFSILNAKAPTLP----PGGTDPHGYHQVPGLVA 70

  Fly   356 LGSPSSLSSSSASSPLGNVSNLVNIANNNTSGAGSGLVKPLQQKVKLPP------VGSPFPKPAY 414
            .|||.:...:....|        :.....||...|....|   .::.||      ..:|..||.|
  Rat    71 PGSPLAADPACLGQP--------HTPGKPTSSCTSRSAPP---GLQAPPPDDVDYATNPHVKPPY 124

  Fly   415 SYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSGWKNSVRHNLSLNKCFEKIERPATNG 479
            ||:.||.:|::.|:|..:.:|.||.::..:|.||.:|...|:||:||||||||||.|:  |....
  Rat   125 SYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRHNLSLNKCFIKV--PREKD 187

  Fly   480 NQRKGCRWAMNPDRINKMDEEVQKWSRKDPAAIRGAMVYPQHLESLERGEMKHGSADSDVELDSQ 544
            ...||..|.::|....::.....|..|..|..|..|..    .::.:............|..::|
  Rat   188 EPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFA----RQAAQEPSTAPWGGPLTVNREAQ 248

  Fly   545 SEIEESSDLEEHEFEDTMVDA-------------------------------MLVEEEDEEEDGD 578
            ..::        |||:...:.                               :|.:||..|.   
  Rat   249 QLLQ--------EFEEATGEGGWGTGEGRLGHKRKQPLPKRVAKVLRPPSTLLLTQEEQGEL--- 302

  Fly   579 DDEQIINDFDAED--ERHANGNQANN---LPINHPLLGQKSNDFDIEV 621
              |.:..:||.|.  |..|.|.:.::   |.::.||......:.|:.|
  Rat   303 --EPLKGNFDWEAIFEAGALGEELSSLEGLELSPPLSPSSHGEVDLTV 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jumuNP_524302.1 Forkhead 411..499 CDD:278670 36/87 (41%)
Foxj1NP_446284.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 7/21 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..110 7/41 (17%)
FH_FOXJ1 121..199 CDD:410797 35/79 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..277 0/20 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.