DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12592 and nyo

DIOPT Version :9

Sequence 1:NP_731474.1 Gene:CG12592 / 41263 FlyBaseID:FBgn0037811 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_651871.2 Gene:nyo / 43716 FlyBaseID:FBgn0039852 Length:805 Species:Drosophila melanogaster


Alignment Length:589 Identity:110/589 - (18%)
Similarity:199/589 - (33%) Gaps:179/589 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DELSSSLSSSVASKFKEFSKRKRISDSFSDLSEELERIGLRQMRKRIKLEKSFERTPKKKVQTKK 81
            |:|..|||.|....|..::::              ..:|:|...|...::         :||..:
  Fly   176 DKLPGSLSRSQFPVFTIYAQK--------------SCLGVRPCSKAWCID---------RVQGYR 217

  Fly    82 HLPPVRKKDSVKRRR-----------IIIASPSDEEHDGKVQTND----DSSENKTEKPKN---- 127
            ....|:...:|..||           ....|.:...|.|..:.:|    ..|...:.:|.:    
  Fly   218 LPEHVKSSQTVLSRRDCLELCLGETEFTCRSANYYRHSGLCELSDMDRITLSAGGSVEPYDGADY 282

  Fly   128 -QSNCSSNASKLSE----AAQLL----NVSEEKSSISETELERSRQVALNELNKSERFNKTETQL 183
             ::||:...|||.|    :.::|    :|.::.::|.|     .|.:.||...:...::..:|  
  Fly   283 LENNCAEEPSKLCEFKRISGKILKTVDSVYQDINTIDE-----CRDLCLNSPYRCHSYDYNDT-- 340

  Fly   184 DISVMEVDSSDHDE--------------EEKTEKVGAKNNRSLY----EIVDSDDEEEQDQDQSD 230
              ..|....|.|..              |..|.::.|..|.|:.    |:: :.....:..|...
  Fly   341 --GDMVCRLSHHSRATLTDVMDPYLDVPEAATYELSACYNVSIECRSGEMI-TKIRTSKLFDGKV 402

  Fly   231 AAKPAESENHSEIKKSTSFMDQMS-------------GAKGNKSVYEIMDSYETEDPKEAGKNEE 282
            .||.|.......:..|..|..:|.             |...|..|.:..|...|.  .:.|....
  Fly   403 YAKGAPKSCAVNVNNSLEFDFRMGYNDLECNVRQSAYGRYMNDIVIQHHDMIVTS--SDLGLAVS 465

  Fly   283 SDKDKPAENGKSDKD----KQAETEMSDEDKPSEIKSPSTIKKSIISTADEEALLAELASSDLSH 343
            ...|...:...:|.|    .:.|:.:|:|   ..|.||:.|.|  |::.|         .||:..
  Fly   466 CQYDLTNKTVLNDVDLGVTGEIESSLSEE---ITIDSPNVIMK--ITSRD---------GSDMKR 516

  Fly   344 LEKMFNPLQKSRRQSLHVPSP------ELAAKNPKLRRRSERVE---VGNDFCPSQSFVDMVAEK 399
            :.::.:|| ..|.:.:...||      ||.|.:     .|:..|   :..:.||:..:: |...:
  Fly   517 MAEVGDPL-ALRFEIVEPNSPYEIFVRELVAMD-----GSDSAEITLIDANGCPTDQYI-MGTIQ 574

  Fly   400 KRQKNKRKRLSK-------------------------------SLSGAPEDLEEMEIKHERKRLK 433
            |..:|::..||:                               |..||..:|:.: :.:.||:..
  Fly   575 KLAQNRKVLLSQFDAFKFPSSEVVQFRALVTPCIPRCEPVICDSEDGASGELKSL-VSYGRKKRS 638

  Fly   434 SSHGASTDSMEEDNENETMTVAEEHHSD-GEVSNG-----EVPIEEKPTTSSEKPSASELPEEGN 492
            ..:|  ||..|       ..::..|..| |.|.:.     .:.|.:|.....|..:.:    .||
  Fly   639 VLNG--TDGAE-------FLISTRHRRDVGPVDDNILLMQSIQITDKFGFQPEDGTTT----HGN 690

  Fly   493 SAPP 496
            .:.|
  Fly   691 DSGP 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12592NP_731474.1 None
nyoNP_651871.2 PAN_1 121..198 CDD:278453 7/35 (20%)
PAN_AP_HGF 208..286 CDD:238532 12/86 (14%)
PAN_1 295..374 CDD:278453 14/87 (16%)
ZP 382..618 CDD:214579 46/259 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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