DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12592 and noah-2

DIOPT Version :9

Sequence 1:NP_731474.1 Gene:CG12592 / 41263 FlyBaseID:FBgn0037811 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_502699.1 Gene:noah-2 / 178365 WormBaseID:WBGene00009926 Length:741 Species:Caenorhabditis elegans


Alignment Length:579 Identity:104/579 - (17%)
Similarity:170/579 - (29%) Gaps:210/579 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 SFERTPKKKVQTKKHLPPVRKKDSVK-RRRIIIASPSDEEHDGK-VQTNDDSS------ENKTEK 124
            ||||....:::..     |:|..:|: |...:.|...::|...| |..:.|:|      |:|..|
 Worm   128 SFERARNTQLEGF-----VKKSVTVENREHCLSACLKEKEFVCKSVNFHYDTSLCELSVEDKRSK 187

  Fly   125 PKN----------QSNCSSNASKLS-EAAQLLNVSEEKSSI------SETELERS--RQVALNEL 170
            |.:          .:||.|..::.. ....|:.|......|      ...|.:.|  .|..|:.|
 Worm   188 PTHVRMSEKIDYYDNNCLSRQNRCGPSGGNLVFVKTTNFEIRYYDHTQSVEAQESYCLQKCLDSL 252

  Fly   171 N---KSERFNKTETQLDISVMEVDSSDHDEEEKTEKVGAKNNRSLYE--IVDSDDEEEQDQDQSD 230
            |   :|..||..|....:       ||.|...:.::.|....:..||  .|.:|......:.|:.
 Worm   253 NTFCRSVEFNPKEKNCIV-------SDEDTFSRADQQGQVVGKDYYEPICVAADLSSSTCRQQAA 310

  Fly   231 AAKPAESENHSEIKKSTS-----------FMD----------------------QMSGAKGNKSV 262
            ..:...|....|:..|..           |.:                      |.:..|.|.| 
 Worm   311 FERFIGSSIEGEVVASAQGVTISDCISLCFQNLNCKSINYDRTASSCFIYAVGRQDANIKANPS- 374

  Fly   263 YEIMDSYE-----------------------TEDP--------------KEAGKNEE-------- 282
               ||.||                       |::|              .:..:|.:        
 Worm   375 ---MDYYEFNCESQFGGMALCTNEGIRFIVNTKEPYTGAIYAAERFSTCSQVVENAKQISITFPP 436

  Fly   283 ----SDKDKPAENGKSDK----------DKQAETEMS-------DEDKPSEIKSPSTIKKSIIST 326
                ||......:||.:.          ..|..||..       |......:|..|.:..:|...
 Worm   437 PTVSSDCGTVIRDGKMEALVVVSLDGVLPHQVTTEWDRFYRVSCDVSMDKMVKEGSVVVTTIYEA 501

  Fly   327 ADEEALLAELA-----SSDLSHLEKMFNPLQKSR--RQSLHVPSPELAAKNPKLRRRSERVEVG- 383
            :.:...:.::|     |::|..|.::..||.|:.  ...|.|.:.|.|..:..:........|| 
 Worm   502 SSQNTTVLDVATPPPVSAELQILNQLEEPLHKASIGDPLLLVITSEQAGPHNMMVTECTATRVGG 566

  Fly   384 ----------NDFCPSQSFVDMVAEKKRQKNKRK------RLSKSL--------------SGAP- 417
                      .:.||....:....|:...||:.|      ||..|.              :|.| 
 Worm   567 FGDTVPFTLIENGCPRYPALVGPVEQDFDKNRLKSDLRAFRLDGSYDVQIVCSIMFCAGPNGCPV 631

  Fly   418 -----EDLEEMEIKHERKRLKS------------------SHGASTDSMEEDNENETMT 453
                 ....|:.:.|.||:..:                  :.|...:.||..| |..||
 Worm   632 SNCLDSGTNELFMSHGRKKRSADLEAGETEEKLSAIIRVFAKGEDEEEMEMAN-NTMMT 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12592NP_731474.1 None
noah-2NP_502699.1 PAN_1 28..112 CDD:278453
PAN_AP_HGF 125..203 CDD:238532 18/79 (23%)
PAN_AP_HGF 217..292 CDD:238532 17/81 (21%)
PAN_1 310..382 CDD:278453 12/75 (16%)
ZP 392..634 CDD:214579 38/241 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.