DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bruce and UBC1

DIOPT Version :9

Sequence 1:NP_001262460.1 Gene:Bruce / 41260 FlyBaseID:FBgn0266717 Length:4976 Species:Drosophila melanogaster
Sequence 2:NP_010462.3 Gene:UBC1 / 851757 SGDID:S000002584 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:139 Identity:41/139 - (29%)
Similarity:66/139 - (47%) Gaps:21/139 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  4632 SRVKRLAQEAVTLSTSLPLSFSSSVFVRCDTDRLDIMKVLITGPADTPYANGCFEFDVFFPPDYP 4696
            ||.||:.:|...:... |.:..:..|| .::| :..:|....||..|||..|.|..|:..|.:||
Yeast     2 SRAKRIMKEIQAVKDD-PAAHITLEFV-SESD-IHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYP 63

  Fly  4697 NQPMLINLETTGRHSVRFNPNLYN-DGKVCLSVL-NTWHGRPEEKWNAQTSSFLQVLVSIQSLIL 4759
            .:|..:..:|...|     ||:.: .|.:||.:| |.|         :...:....|:|:|:|:.
Yeast    64 FKPPKMQFDTKVYH-----PNISSVTGAICLDILKNAW---------SPVITLKSALISLQALLQ 114

  Fly  4760 VPEPYFNEP 4768
            .|||  |:|
Yeast   115 SPEP--NDP 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BruceNP_001262460.1 BIR 251..321 CDD:279047
DUF3643 3539..3664 CDD:289152
UQ_con 4636..4790 CDD:278603 38/135 (28%)
UBC1NP_010462.3 COG5078 1..151 CDD:227410 41/139 (29%)
UBA_3 161..215 CDD:117832
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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