DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bruce and UBC23

DIOPT Version :9

Sequence 1:NP_001262460.1 Gene:Bruce / 41260 FlyBaseID:FBgn0266717 Length:4976 Species:Drosophila melanogaster
Sequence 2:NP_001324377.1 Gene:UBC23 / 816195 AraportID:AT2G16920 Length:1102 Species:Arabidopsis thaliana


Alignment Length:615 Identity:163/615 - (26%)
Similarity:249/615 - (40%) Gaps:152/615 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  4293 SHQSHNNRIGAPISEPSPSGTSSGSGTIGNGSGNGSVSGTKTNAPEEATPSATSDDKSHMYWAKG 4357
            |||.....:....:|||..        :...|..|:::|.|             |....:.||.|
plant   599 SHQEAKILVDKEENEPSTD--------LSKLSWVGNITGLK-------------DGDIEVTWADG 642

  Fly  4358 TGFGTGSTTQSWNVEQALLRQKSEEEHVTVLLLVLASYINPGDCIPSEMCGE----DILAYHDVR 4418
            |....|                   .|        |.|:...|.....:.||    |..::..:.
plant   643 TISTVG-------------------PH--------AVYVVGRDDDDESVAGESETSDAASWETLN 680

  Fly  4419 DVTGELPPIFQTLLQQSCLIPALSS---YLRNDSVLDITRHIPLYRAILKLLRALSLSKMLVSLL 4480
            |.....|.|.:..|.:|..|...|.   |..|||..:....:|        |.|:.....|.|.:
plant   681 DDDRGAPEIPEEDLGRSSSIEGNSDADIYAENDSGRNGALALP--------LAAIEFVTRLASGI 737

  Fly  4481 QPSASGSGDSTPPIVELLTSMKTCVDTYAKRLKVNKKSNIKGQTHQLTFNIDDGDDEGLALLIPD 4545
            ...|..|.||:       :|..|..:.|.:....|....        |.::||....       .
plant   738 FSRARKSVDSS-------SSDYTVENVYKQAESTNPSDE--------TDSLDDPSPS-------K 780

  Fly  4546 IHETSVLVQKTTDADALINMLHTNEDGSAQLEPQSKSIEQRYLELMKKRQFDTFDMIVESDNNSF 4610
            ::.|.....|.|.|:|. |:|  :.:.|..||.:.|.:..                  |.|:.||
plant   781 VNVTDNCESKGTQANAK-NIL--SGETSTFLEDEDKPVPS------------------EGDSCSF 824

  Fly  4611 -RFVVS-----HHFEKMVRLAGDRYHPSR-VKRLAQEAVTLSTSLPLSFSSSVFVRCDTDRLDIM 4668
             ||.:|     |||   :.:.|.:....: .|::.|:...|..:||    ..:|||...||:|::
plant   825 RRFDISQDPLDHHF---LGVDGQKTKERQWFKKVDQDWKILQNNLP----DGIFVRAYEDRMDLL 882

  Fly  4669 KVLITGPADTPYANGCFEFDVFFPPDYPNQPMLINLETTGRHSVRFNPNLYNDGKVCLSVLNTWH 4733
            :.:|.|...|||.:|.|.||...|.|||:.|......:.|   .|.|||||.:||||||:||||.
plant   883 RAVIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGG---WRLNPNLYEEGKVCLSLLNTWT 944

  Fly  4734 GRPEEKWNAQTSSFLQVLVSIQSLILVPEPYFNEPGFERSRGSPSGTNSSREYNSNIYQACVRWA 4798
            ||..|.|:.::||.||||||:|.|:|..:|||||.|:::..|:..|..:|..||.|.:....: .
plant   945 GRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLGYNENTFLLNCK-T 1008

  Fly  4799 MLEQIRSPSQCFKDVIHKHFWLKRE----EIC-AQIEGW-IEELGKPQ--YTERA---SRTISFN 4852
            |:..:|.|.:.|:::|..|| .||.    :.| |.::|: |..|.|..  ..||:   |.::.|.
plant  1009 MMYLMRKPPKDFEELIKDHF-RKRGYYILKACDAYMKGYLIGSLTKDASVIDERSSANSTSVGFK 1072

  Fly  4853 SMVLR----------------RHYRHLREE 4866
            .|:.:                ..::||:::
plant  1073 LMLAKIAPKLFSALSEVGADCNEFQHLQQQ 1102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BruceNP_001262460.1 BIR 251..321 CDD:279047
DUF3643 3539..3664 CDD:289152
UQ_con 4636..4790 CDD:278603 67/153 (44%)
UBC23NP_001324377.1 UBCc 857..980 CDD:238117 61/129 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0895
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46116
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.