DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bruce and ube2d2

DIOPT Version :9

Sequence 1:NP_001262460.1 Gene:Bruce / 41260 FlyBaseID:FBgn0266717 Length:4976 Species:Drosophila melanogaster
Sequence 2:NP_957253.1 Gene:ube2d2 / 393934 ZFINID:ZDB-GENE-120312-1 Length:147 Species:Danio rerio


Alignment Length:131 Identity:41/131 - (31%)
Similarity:62/131 - (47%) Gaps:19/131 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  4634 VKRLAQEAVTLSTSLPLSFSSSVFVRCDTDRLDIMKVLITGPADTPYANGCFEFDVFFPPDYPNQ 4698
            :||:.:|...|....|...|:...    .|.:...:..|.||.|:||..|.|...:.||.|||.:
Zfish     3 LKRIHKELHDLGRDPPAQCSAGPV----GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFK 63

  Fly  4699 PMLINLETTGRHSVRFNPNLYNDGKVCLSVLNTWHGRPEEKWN-AQTSSFLQVLVSIQSLILVPE 4762
            |..:...|...|     ||:.::|.:||.:|.:       :|: |.|.|  :||:||.||:..|.
Zfish    64 PPKVAFTTRIYH-----PNINSNGSICLDILRS-------QWSPALTIS--KVLLSICSLLCDPN 114

  Fly  4763 P 4763
            |
Zfish   115 P 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BruceNP_001262460.1 BIR 251..321 CDD:279047
DUF3643 3539..3664 CDD:289152
UQ_con 4636..4790 CDD:278603 40/129 (31%)
ube2d2NP_957253.1 UBCc 1..146 CDD:412187 41/131 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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