DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bruce and Ube2a

DIOPT Version :9

Sequence 1:NP_001262460.1 Gene:Bruce / 41260 FlyBaseID:FBgn0266717 Length:4976 Species:Drosophila melanogaster
Sequence 2:NP_062642.1 Gene:Ube2a / 22209 MGIID:102959 Length:152 Species:Mus musculus


Alignment Length:172 Identity:48/172 - (27%)
Similarity:79/172 - (45%) Gaps:28/172 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  4631 PSRVKRLAQEAVTLSTSLPLSFSSSVFVRCDTDRLDIMKVLITGPADTPYANGCFEFDVFFPPDY 4695
            |:| :||.::...|....|...|.:.    ..:.:.:...:|.||..||:.:|.|:..:.|..:|
Mouse     4 PAR-RRLMRDFKRLQEDPPAGVSGAP----SENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEY 63

  Fly  4696 PNQPMLINLETTGRHSVRFNPNLYNDGKVCLSVLNTWHGRPEEKWNAQTSSFLQVLVSIQSLILV 4760
            ||:|..:...     |..|:||:|.||.:||.:|       :.:| :.|.....:|.|||||:..
Mouse    64 PNKPPTVRFV-----SKMFHPNVYADGSICLDIL-------QNRW-SPTYDVSSILTSIQSLLDE 115

  Fly  4761 PEPYFNEPGFERSRGSPSGTNSSREYNSNIYQACVRWAMLEQ 4802
            |.|  |.|.  .|:.:.....:.|||...:.      |::||
Mouse   116 PNP--NSPA--NSQAAQLYQENKREYEKRVS------AIVEQ 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BruceNP_001262460.1 BIR 251..321 CDD:279047
DUF3643 3539..3664 CDD:289152
UQ_con 4636..4790 CDD:278603 43/153 (28%)
Ube2aNP_062642.1 UQ_con 8..145 CDD:395127 44/163 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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