DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bruce and ubc-17

DIOPT Version :9

Sequence 1:NP_001262460.1 Gene:Bruce / 41260 FlyBaseID:FBgn0266717 Length:4976 Species:Drosophila melanogaster
Sequence 2:NP_509188.3 Gene:ubc-17 / 181979 WormBaseID:WBGene00006712 Length:728 Species:Caenorhabditis elegans


Alignment Length:647 Identity:209/647 - (32%)
Similarity:306/647 - (47%) Gaps:125/647 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  4273 RRVVIEVGAMHLVLNCLGIFSHQSHNNRIGAPISEPSPSGTSSGSGTIGNGSGNGSVSGTKTNAP 4337
            |:..:|.|.:|.:|..:|           ...||:.|.|..|:..              .|..|.
 Worm    96 RKQFVECGVIHHLLELIG-----------ETAISDFSASSRSADE--------------QKRRAR 135

  Fly  4338 EEATPSATSDDKSHMYWAKGTGFGTGSTTQSWNVEQALLRQKSEEEHVTVLLLVLASYINPGDCI 4402
            ..::.|.     ||    ||||:|||||...|::|:.:..:...|||:|.||.:|.|:       
 Worm   136 RNSSASL-----SH----KGTGYGTGSTRSRWDIERTVEEKLIREEHLTWLLSILNSF------- 184

  Fly  4403 PSEMCG-----------EDILAYHDVRDVTGELPPIFQTLLQQSCLIPALSSYLRNDSVLDITRH 4456
               |.|           |:::          .:..|...|:..|.::..|...|||||..|::.|
 Worm   185 ---MLGWPTTDNLKTKPEELV----------HMTEIAIKLIADSSVLSILEYNLRNDSFFDVSEH 236

  Fly  4457 IPLYRAILKLLRALSLSKMLVSLLQPSASGSGDSTPPIVELLTSMKT-CVDTYAKRLKVNKKSNI 4520
            |.:|:|:|:...:::                  :||.:|..|....| ...:.||.|....|.||
 Worm   237 IEIYQALLETAASMA------------------ATPGLVPFLVRPYTSSAKSIAKELIPRFKENI 283

  Fly  4521 -------KGQTHQLTFNIDDGDDEGLALLIPDIHETSVLVQKTTDADALINM----------LHT 4568
                   .|...:..|.:.:...: :.||...:...:...::|...:..|..          ||:
 Worm   284 LSIQARWGGTLEETNFRMAEFTAK-VTLLSDYVINAARAYEQTLPPEQRIQTATHRRPSHSGLHS 347

  Fly  4569 NEDGSAQLEPQSKSIEQRYLELMKKRQFDTFDMIVESDNNSFRFVVSHHFEKMVRLAGDRYHP-- 4631
            ...|       .|..|..|...|::.|..|...|    .:..:..|.:.|.|..:.. :.:.|  
 Worm   348 KMQG-------PKDDETIYKNKMQELQLQTAKFI----GDFGKLCVPYVFRKEAKNI-NPFSPHL 400

  Fly  4632 -SRVKRLAQEAVTLSTSLPLSFSSSVFVRCDTDRLDIMKVLITGPADTPYANGCFEFDVFFPPDY 4695
             .|.||:|:|..:::.:|||:.|:|::|..|..|:||:||||:||.|||||||.||||:|||..|
 Worm   401 RDRTKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFPTGY 465

  Fly  4696 PNQPMLINLETTGRHSVRFNPNLYNDGKVCLSVLNTWHGRPEEKWNAQTSSFLQVLVSIQSLILV 4760
            |..|......|||..:||||||||||||:|||:|.||.||||||||.. .|.:|||||||.||.|
 Worm   466 PFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPY-CSLMQVLVSIQGLIFV 529

  Fly  4761 PEPYFNEPGFERSRGSPSGTNSSREYNSNIYQACVRWAMLEQIRSPSQCFKDVIHKHFWLKREEI 4825
            .:||||||||||.:|:..|...||:||..|..|.:.:|:.||::.||:.||:||.||.|||||.|
 Worm   530 KDPYFNEPGFERYQGTDRGDEYSRKYNLQIEHATLNYAIREQLKKPSEHFKEVIEKHLWLKREAI 594

  Fly  4826 CAQIEGWIEELGKPQYTERASR-------TISFNSMVLRRHYRHLREELSKLKPPRGLEDLD 4880
            ..|.:.||:.:......::.|:       ...||.....|...:|.:||..::.|...|:.:
 Worm   595 LKQAQAWIDNVSNDFGDDKMSKRKDVFAFETGFNPATQERVIHNLIQELQAMQSPFAKEEAE 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BruceNP_001262460.1 BIR 251..321 CDD:279047
DUF3643 3539..3664 CDD:289152
UQ_con 4636..4790 CDD:278603 92/153 (60%)
ubc-17NP_509188.3 UBCc 406..>527 CDD:214562 73/121 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163327
Domainoid 1 1.000 193 1.000 Domainoid score I1866
eggNOG 1 0.900 - - E2759_KOG0895
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto20520
orthoMCL 1 0.900 - - OOG6_104392
Panther 1 1.100 - - LDO PTHR46116
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2875
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.770

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