DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6293 and AT5G25420

DIOPT Version :9

Sequence 1:NP_001262459.1 Gene:CG6293 / 41259 FlyBaseID:FBgn0037807 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_197924.1 Gene:AT5G25420 / 832615 AraportID:AT5G25420 Length:419 Species:Arabidopsis thaliana


Alignment Length:448 Identity:117/448 - (26%)
Similarity:208/448 - (46%) Gaps:101/448 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PQLLYAINDNPPWYLSIFLAFQHYLTMIGAIVSIPFILTPALCMSDEDANRGIIISTMIFVTGIV 97
            |.:.|.:|..|||..::.|.|||||..:|..|.||.:|.|  .|...||.:..:|.|::||:|:.
plant    40 PGIQYCVNSPPPWLEAVVLGFQHYLLSLGITVLIPSLLVP--LMGGGDAEKVKVIQTLLFVSGLT 102

  Fly    98 TYFQATWGVRLPIVQGGTISFLVPTLAILALPQWKCPEQAVMDAMDEAEREELWQVR-MRELSGA 161
            |.||:.:|.|||::...:.::::|..:|:...::..       ..|..||    .|| ||.:.||
plant   103 TLFQSFFGTRLPVIASASYAYIIPITSIIYSTRFTY-------YTDPFER----FVRTMRSIQGA 156

  Fly   162 IAVSAMVQVILGYTGLVGKILKYVTPLTIVPTVSLVGLTLFEHAAETASKHWGIAVGTTGMLTLF 226
            :.::...||::.:.|:...|:::::||:|.|.|:..||.|:         |.|..:...|     
plant   157 LIITGCFQVLVCFLGVWRNIVRFLSPLSIAPLVTFTGLGLY---------HIGFPLVKKG----- 207

  Fly   227 SQIMSNVPVPILAYRKGHGLEIRQFQLFRLFPVLLTIMIMWGLCGILTATDVF---PPSHPS--R 286
                     |::  ..|:..:        .:.::|.|.::|....:||::.|:   |.:..:  |
plant   208 ---------PMI--WDGNRCD--------RYGMMLCIPVVWLFAQLLTSSGVYDHKPQTTQTSCR 253

  Fly   287 TDVRLNVLTSAKWFYVPYPGQFGWPSVTLSGVLGMLAGVLACTVESLSYYPTVSQMSGAHSPPLH 351
            || |..::|:..           .|:..::....|:|.......||                   
plant   254 TD-RTGLITNTP-----------CPTFDITDSFAMMAASFVTLFES------------------- 287

  Fly   352 AINRGIGTEGFGTVLAGLWGAGNGTNTFGENVGAIGVTKIGSRRVIQWAALIMVLQGVIGKFGAI 416
                           .||:.|   :..:|:|||.:.:||:|||||||.:|..|:...:.|||||.
plant   288 ---------------TGLFYA---SARYGKNVGLLAMTKVGSRRVIQISAAFMLFFSIFGKFGAF 334

  Fly   417 FILIPDSVVGGIFCVMFGMIIAFGLSTLQYVDLRSARNLYILGLSIFFPMVLCRWMQK 474
            |..||..::..::|::...:.:.|||.||:.:|.|....:|||.|.|..:.:.::.::
plant   335 FASIPLPIMASLYCIVLCFVSSAGLSFLQFCNLNSFNTKFILGFSFFMAISIPQYFRE 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6293NP_001262459.1 HCO3_cotransp 32..519 CDD:304903 117/448 (26%)
Xan_ur_permease 48..464 CDD:279232 110/421 (26%)
AT5G25420NP_197924.1 HCO3_cotransp 46..386 CDD:304903 115/434 (26%)
Xan_ur_permease 53..392 CDD:279232 111/433 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2233
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 291 1.000 Inparanoid score I827
OMA 1 1.010 - - QHG61611
OrthoDB 1 1.010 - - D387031at2759
OrthoFinder 1 1.000 - - FOG0000230
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100583
Panther 1 1.100 - - O PTHR11119
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X261
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.840

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