DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6293 and Slc23a1

DIOPT Version :9

Sequence 1:NP_001262459.1 Gene:CG6293 / 41259 FlyBaseID:FBgn0037807 Length:573 Species:Drosophila melanogaster
Sequence 2:XP_006254664.1 Gene:Slc23a1 / 50621 RGDID:619875 Length:666 Species:Rattus norvegicus


Alignment Length:571 Identity:253/571 - (44%)
Similarity:359/571 - (62%) Gaps:23/571 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DATDASKSYSQAANTPPSNEKPKPQLLYAINDNPPWYLSIFLAFQHYLTMIGAIVSIPFILTPAL 74
            |:...|....||    |...:||..:||.|.|.|||||.|.|.||||||.....:::||:|..||
  Rat    79 DSAGTSTRDQQA----PLPAEPKFDMLYKIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAEAL 139

  Fly    75 CMSDEDANRGIIISTMIFVTGIVTYFQATWGVRLPIVQGGTISFLVPTLAILALPQWKCP--EQA 137
            |:..:......:|.|:....||.|..|.|.|:|||:.|....:||||..|||||.:||||  |:.
  Rat   140 CVGRDQHMISQLIGTIFTCVGITTLIQTTVGIRLPLFQASAFAFLVPAKAILALERWKCPPEEEI 204

  Fly   138 VMDAMDEAEREELWQVRMRELSGAIAVSAMVQVILGYTGLVGKILKYVTPLTIVPTVSLVGLTLF 202
            ..:.........:|..|:||:.|||.||::|:|::|..||.|.:|.|:.|||:.|||||:||::|
  Rat   205 YGNWSMPLNTSHIWHPRIREVQGAIMVSSVVEVVIGLLGLPGALLSYIGPLTVTPTVSLIGLSVF 269

  Fly   203 EHAAETASKHWGIAVGTTGMLTLFSQIMSNVPVPILAYRKGHGLEIRQFQLFRLFPVLLTIMIMW 267
            :.|.:.|..||||:..:..::.||||.:.|:...:..||.|.||.:.:.|:|::||::|.||.:|
  Rat   270 QAAGDRAGSHWGISACSILLIVLFSQYLRNLTFLLPVYRWGKGLTLFRIQIFKMFPIVLAIMTVW 334

  Fly   268 GLCGILTATDVFPP-----SHPSRTDVRLNVLTSAKWFYVPYPGQFGWPSVTLSGVLGMLAGVLA 327
            .||.:||.|||.|.     ...:|||.|.:::..:.|..:|||.|:|.|:||::.||||.:..||
  Rat   335 LLCYVLTLTDVLPADPTVYGFQARTDARGDIMAISPWIRIPYPCQWGLPTVTVAAVLGMFSATLA 399

  Fly   328 CTVESLSYYPTVSQMSGAHSPPLHAINRGIGTEGFGTVLAGLWGAGNGTNTFGENVGAIGVTKIG 392
            ..:||:..|...::::||..||:|||||||.|||...::|||.|.|||:.:...|:|.:|:||:|
  Rat   400 GIIESIGDYYACARLAGAPPPPVHAINRGIFTEGVCCIIAGLLGTGNGSTSSSPNIGVLGITKVG 464

  Fly   393 SRRVIQWAALIMVLQGVIGKFGAIFILIPDSVVGGIFCVMFGMIIAFGLSTLQYVDLRSARNLYI 457
            ||||:|:.|.||::.|.||||.|:|..:||.::||:||.:||||.|.|||.||:||:.|:|||::
  Rat   465 SRRVVQYGAGIMLILGAIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFV 529

  Fly   458 LGLSIFFPMVLCRWMQKNPGAIDTGNKTVDSTLSVLLGTTILVGGVLGCLLDNIIPGTPEERGLI 522
            ||.|:||.:.|..::..|||||:||...||..|:|||.|.:.|||.|..:|||.:||:|||||||
  Rat   530 LGFSMFFGLTLPNYLDSNPGAINTGVPEVDQILTVLLTTEMFVGGCLAFILDNTVPGSPEERGLI 594

  Fly   523 DW-----ANEMPLGDDNVNDGTATDYDFPLGMDAIRRWKWTYYIPFMPTYK 568
            .|     ||...|       .:...||||.||..::|..:..|||..|.::
  Rat   595 QWKAGAHANSETL-------ASLKSYDFPFGMGMVKRTTFFRYIPICPVFR 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6293NP_001262459.1 HCO3_cotransp 32..519 CDD:304903 227/493 (46%)
Xan_ur_permease 48..464 CDD:279232 189/422 (45%)
Slc23a1XP_006254664.1 HCO3_cotransp 97..551 CDD:304903 205/453 (45%)
Xan_ur_permease 114..541 CDD:279232 191/426 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 431 1.000 Domainoid score I567
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 503 1.000 Inparanoid score I1298
OMA 1 1.010 - - QHG61611
OrthoDB 1 1.010 - - D219070at33208
OrthoFinder 1 1.000 - - FOG0000230
OrthoInspector 1 1.000 - - otm45472
orthoMCL 1 0.900 - - OOG6_100583
Panther 1 1.100 - - O PTHR11119
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X261
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.980

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