DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6293 and Slc23a3

DIOPT Version :9

Sequence 1:NP_001262459.1 Gene:CG6293 / 41259 FlyBaseID:FBgn0037807 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001102476.1 Gene:Slc23a3 / 367298 RGDID:1307402 Length:610 Species:Rattus norvegicus


Alignment Length:519 Identity:160/519 - (30%)
Similarity:261/519 - (50%) Gaps:33/519 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NTPPSNEKPKPQLLYAIND----------NP-PWYLSIFLAFQHYLTMIGAIVSIPFILTPALCM 76
            :||    .|:|.||..:.|          .| .|.||..||.||:|.:...:.:...:|..:|..
  Rat    18 DTP----APRPPLLPPLQDPSSRSWASWCGPSTWGLSCLLALQHFLVLTSLLWASHLLLLHSLPP 78

  Fly    77 SDEDANRGIIISTMIFVTGIVTYFQATWGVRLPIVQGGTISFLVPTLAIL--ALP-QWKCPEQA- 137
            .........::::..|..|:.|..|...|.|||::|..::.||:|.|.:.  .|| ..|.|..| 
  Rat    79 GGLSYPPAQLLASSFFSCGMSTVLQTWMGSRLPLIQAPSLEFLIPALVLTNQKLPLMTKTPGNAS 143

  Fly   138 ----VMDAMDEAEREELWQVRMRELSGAIAVSAMVQVILGYTGLVGKILKYVTPLTIVPTVSLVG 198
                :..........|||...:||:|||:.:|.::|..:|..|:.|::..|..||.:.|::.:.|
  Rat   144 LSLRLCSLTRSCHGPELWNTSLREVSGAVVMSGLLQGTMGLLGVPGRVFPYCGPLVLAPSLVVAG 208

  Fly   199 LTLFEHAAETASKHWGIAVGTTGMLTLFSQIMSNVPVPILAYRKGHGLEIRQF-QLFRLFPVLLT 262
            |:..:..|:..|.|||:|:....::.:.||.:.:..||:.::|.........: .:|||..||..
  Rat   209 LSAHKEVAQFCSAHWGLALLLILLMVVCSQHLGSCQVPLCSWRPASTSSTHIYIPIFRLLSVLAP 273

  Fly   263 IMIMWGLCGILTATDVFPPSHPSRTDVRLNVLTSAKWFYVPYPGQFGWPSVTLSGVLGMLAGVLA 327
            :..:| |........|.|        ::|:..:.|.||::|:||::.||.:|...:...::..||
  Rat   274 VACVW-LISACLGLSVIP--------LQLSEPSDAPWFWLPHPGEWEWPLLTPKALAAGISMALA 329

  Fly   328 CTVESLSYYPTVSQMSGAHSPPLHAINRGIGTEGFGTVLAGLWGAGNGTNTFGENVGAIGVTKIG 392
            .:..||..|....|:.....||.||.:||:..||.|:|||||.|:..||.:...|||.:.:.:.|
  Rat   330 ASTSSLGCYALCGQLLHLSPPPPHACSRGLSLEGLGSVLAGLLGSPLGTASSFPNVGTVSLFQTG 394

  Fly   393 SRRVIQWAALIMVLQGVIGKFGAIFILIPDSVVGGIFCVMFGMIIAFGLSTLQYVDLRSARNLYI 457
            ||||.....|..:..|:..:...:|..||..|:||:..|...::::.|.|:....|:.|.||::|
  Rat   395 SRRVAHLVGLFCMGLGLSPRLAQLFTNIPLPVLGGVLGVTQAVVLSAGFSSFHLADIDSGRNVFI 459

  Fly   458 LGLSIFFPMVLCRWMQKNPGAIDTGNKTVDSTLSVLLGTTILVGGVLGCLLDNIIPGTPEERGL 521
            :|.|||..::|.||:::.|..::||...:|..|..||...|.:.|:||.||:|.|.||..||||
  Rat   460 VGFSIFMALLLPRWLREAPILLNTGWSPMDMFLRSLLAEPIFLAGLLGFLLENTISGTRIERGL 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6293NP_001262459.1 HCO3_cotransp 32..519 CDD:304903 153/506 (30%)
Xan_ur_permease 48..464 CDD:279232 125/424 (29%)
Slc23a3NP_001102476.1 Xan_ur_permease 79..476 CDD:395690 121/405 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345869
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2233
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D219070at33208
OrthoFinder 1 1.000 - - FOG0000230
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11119
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

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