DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6293 and RGD1565367

DIOPT Version :9

Sequence 1:NP_001262459.1 Gene:CG6293 / 41259 FlyBaseID:FBgn0037807 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_001256967.1 Gene:RGD1565367 / 312226 RGDID:1565367 Length:614 Species:Rattus norvegicus


Alignment Length:545 Identity:252/545 - (46%)
Similarity:355/545 - (65%) Gaps:21/545 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LLYAINDNPPWYLSIFLAFQHYLTMIGAIVSIPFILTPALCMSDEDANRGIIISTMIFVTGIVTY 99
            |.|.|.|.|||||.|||..||:||.:|.:|::|.||...||:..:...:..:|||:.||:||.|.
  Rat    43 LAYGILDRPPWYLCIFLGIQHFLTALGGLVAVPLILAKDLCLQHDPLTQSYLISTIFFVSGICTL 107

  Fly   100 FQATWGVRLPIVQGGTISFLVPTLAILALPQWKCPE---QAVMDAMDEAEREELWQVRMRELSGA 161
            .|...||||||:||||.:|:.|:||:|:||.|||||   .|.:......|..|.||.|:|||.||
  Rat   108 LQVLLGVRLPILQGGTFAFVAPSLAMLSLPAWKCPEWTLNASLVNTSSPEFTEEWQKRIRELQGA 172

  Fly   162 IAVSAMVQVILGYTGLVGKILKYVTPLTIVPTVSLVGLTLFEHAAETASKHWGIAVGTTGMLTLF 226
            :.|::.:|:::|::||:|.:::::.||||.||:|||.|.||:.|:..|..||||:..|..::.||
  Rat   173 VMVASCIQMLVGFSGLIGYLMRFIGPLTIAPTISLVALPLFDSASNDAGTHWGISALTIFLIVLF 237

  Fly   227 SQIMSNVPVPILAYRKGHGLEIRQFQLFRLFPVLLTIMIMWGLCGILTATDVFPPS-----HPSR 286
            ||.:.||.||:..|..|....|.:|.||::|||||.:.:.|..|.:||.|:.||.|     :.:|
  Rat   238 SQYLKNVMVPVPVYGGGKRCHISKFNLFQVFPVLLALCLSWLFCFVLTVTNTFPESPTAYGYMAR 302

  Fly   287 TDVRLNVLTSAKWFYVPYPGQFGWPSVTLSGVLGMLAGVLACTVESLSYYPTVSQMSGAHSPPLH 351
            ||.:.:||:.|.||..|||||:|.|:::|:||.|::|||::..|||:..|...:::.||..||.|
  Rat   303 TDTKGSVLSQAPWFRFPYPGQWGLPTISLAGVFGIIAGVISSMVESVGDYHACARLVGAPPPPKH 367

  Fly   352 AINRGIGTEGFGTVLAGLWGAGNGTNTFGENVGAIGVTKIGSRRVIQWAALIMVLQGVIGKFGAI 416
            |||||||.||.|.:|||.||.||||.::.|||||:|:|::|||.||..|..:::|.|:.||.||.
  Rat   368 AINRGIGIEGLGCLLAGAWGTGNGTTSYSENVGALGITRVGSRMVIVAAGCVLLLMGMFGKIGAA 432

  Fly   417 FILIPDSVVGGIFCVMFGMIIAFGLSTLQYVDLRSARNLYILGLSIFFPMVLCRWMQKNPGAIDT 481
            |..||..|:||:|.||||:|.|.|:|.|||||:.|:|||::.|.|||..:.:..|:.|||..:.|
  Rat   433 FATIPTPVIGGMFLVMFGIISAVGISNLQYVDMNSSRNLFVFGFSIFCGLAVPNWVNKNPEKLQT 497

  Fly   482 GNKTVDSTLSVLLGTTILVGGVLGCLLDNIIPGTPEERGLIDWANEMPLGDDNVNDGTATD-YDF 545
            |...:|..:.|||.|.:.|||.||.:|||.|||:.|||||:.|..   :.:|:.....|:. |..
  Rat   498 GILQLDQVIQVLLTTGMFVGGFLGFVLDNTIPGSLEERGLLAWGE---IQEDSEETPKASKVYGL 559

  Fly   546 PLGMDAIRRWKW-----TYYIPFMP 565
            |.|:..    |:     |..:||.|
  Rat   560 PWGIGT----KFCTSSCTRILPFWP 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6293NP_001262459.1 HCO3_cotransp 32..519 CDD:304903 237/491 (48%)
Xan_ur_permease 48..464 CDD:279232 204/423 (48%)
RGD1565367NP_001256967.1 HCO3_cotransp 49..530 CDD:304903 231/480 (48%)
Xan_ur_permease 57..487 CDD:279232 205/429 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 431 1.000 Domainoid score I567
eggNOG 1 0.900 - - E1_COG2233
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 503 1.000 Inparanoid score I1298
OMA 1 1.010 - - QHG61611
OrthoDB 1 1.010 - - D219070at33208
OrthoFinder 1 1.000 - - FOG0000230
OrthoInspector 1 1.000 - - otm45472
orthoMCL 1 0.900 - - OOG6_100583
Panther 1 1.100 - - O PTHR11119
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X261
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.880

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