DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6293 and R11E3.2

DIOPT Version :9

Sequence 1:NP_001262459.1 Gene:CG6293 / 41259 FlyBaseID:FBgn0037807 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_500641.1 Gene:R11E3.2 / 187811 WormBaseID:WBGene00020004 Length:546 Species:Caenorhabditis elegans


Alignment Length:551 Identity:172/551 - (31%)
Similarity:298/551 - (54%) Gaps:38/551 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EKPKPQLLYAINDNPPWYLSIFLAFQHYLTMIGAIVSIPFILTPALCMSDEDANRGIIISTMIFV 93
            |:.:.:|::.:||.|.....:.:.||..:..|..::.||::::..:|..|::....:.:.:..||
 Worm     3 EEKEDELVHHVNDIPSIPTILLIGFQQMMICISMLLVIPYMMSDMVCPGDKETEIRVQLISASFV 67

  Fly    94 T-GIVTYFQATWGVRLPIVQGGTISFLVPTLAILALPQWKCPEQAVMDAMDEAEREELWQVRMRE 157
            | ||.|..|.|:|:||.|:.|.:.::| |.|.... ..:.|         :|.....|||.:|:.
 Worm    68 TAGIATILQTTFGMRLAILHGPSFAYL-PVLNTFQ-STYPC---------NEHTDTSLWQHKMQM 121

  Fly   158 LSGAIAVSAMVQVILGYTGLVGKILKYVTPLTIVPTVSLVGLTLFEHAAETASKHWGIAVGTTGM 222
            :||:..|:.:|..:.|:|||:|.:.:::.|:||||.::|:.::......:..:.||..:|... |
 Worm   122 ISGSCLVAVLVMPLFGFTGLIGFLSQFIGPITIVPIMTLLTISAVSDVEQKMALHWMSSVEFL-M 185

  Fly   223 LTLFSQIMSNVPVPILAYRKGHGLEIRQFQLFR-----LFPVLLTIMIMWGLCGILTATDVFPPS 282
            |.:|..::.:..:|:.||    .|:.|.|.:.|     .||.::.|.|.|.:|.|||.|:..|.:
 Worm   186 LVVFIVLLEHWEMPLPAY----SLKRRHFYIARRKILSQFPYIIGIAIGWLICYILTVTNAIPAN 246

  Fly   283 HPSRTDVR--LNVLTSAKWFYVPYPGQFGWPSVTLSGVLGMLAGVLACTVESLSYYPTVSQMSGA 345
            .|:|||..  :.:|.|..|.:||.|||:|.|.:.:|.:.|.:|......:||:..|...:::|..
 Worm   247 SPARTDQNSTMEILKSTPWVHVPIPGQYGTPIIDISLLCGFIASSFVAMIESIGDYNLCAKLSKQ 311

  Fly   346 HSPPLHAINRGIGTEGFGTVLAGLWGAGNGTNTFGENVGAIGVTKIGSRRVIQWAALIMVLQGVI 410
            ...|...:|||...||.|.:|:..:|.|.|..|:.||:..:.|||:.||..:|.|.:.:::.|:.
 Worm   312 GRIPTSNLNRGFIVEGIGCMLSSSFGIGTGITTYAENIAIMSVTKVASRITMQTAGIFLLIAGIF 376

  Fly   411 GKFGAIFILIPDSVVGGIFCVMFGMIIAFGLSTLQYVDLRSARNLYILGLSIFFPMVLCRWMQKN 475
            .||.|:..:||:.||||:..:...|:....|..|..||||.:|||.|:|:::...:.:....:.|
 Worm   377 SKFAAVLAMIPEPVVGGVLAIGICMVNGVVLRNLMTVDLRLSRNLTIMGIAVIMGLTVALHFENN 441

  Fly   476 PGAIDTGNKTVDSTLSVLLGTTILVGGVLGCLLDNIIPG-TPEERGLIDWANEMPLGDDNV---N 536
            |  :.|||:|||:....||...:|:||::...||||.|| |.|:||.....::   |:|::   |
 Worm   442 P--LKTGNQTVDNVFGTLLTIRMLIGGIIAFTLDNIAPGATREQRGFRKADDD---GEDDIPVEN 501

  Fly   537 DGTATDYDFPLGMDA-IRRWKWTYYIPFMPT 566
            :|.|    .|..|:. ..:::|..|||.:|:
 Worm   502 NGFA----LPSFMNRFFLKYRWLTYIPLIPS 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6293NP_001262459.1 HCO3_cotransp 32..519 CDD:304903 157/495 (32%)
Xan_ur_permease 48..464 CDD:279232 132/423 (31%)
R11E3.2NP_500641.1 Xan_ur_permease 22..439 CDD:279232 132/432 (31%)
HCO3_cotransp 61..437 CDD:304903 125/391 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 242 1.000 Domainoid score I1235
eggNOG 1 0.900 - - E1_COG2233
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H112955
Inparanoid 1 1.050 287 1.000 Inparanoid score I1711
Isobase 1 0.950 - 0 Normalized mean entropy S4185
OMA 1 1.010 - - QHG61611
OrthoDB 1 1.010 - - D219070at33208
OrthoFinder 1 1.000 - - FOG0000230
OrthoInspector 1 1.000 - - otm14321
orthoMCL 1 0.900 - - OOG6_100583
Panther 1 1.100 - - O PTHR11119
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1881
SonicParanoid 1 1.000 - - X261
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1514.860

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