DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3999 and GCV2

DIOPT Version :9

Sequence 1:NP_001262456.1 Gene:CG3999 / 41253 FlyBaseID:FBgn0037801 Length:985 Species:Drosophila melanogaster
Sequence 2:NP_013914.1 Gene:GCV2 / 855227 SGDID:S000004801 Length:1034 Species:Saccharomyces cerevisiae


Alignment Length:1008 Identity:513/1008 - (50%)
Similarity:693/1008 - (68%) Gaps:48/1008 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SQSLLLRCGHRYLATTPVEEVIFPTKSD-------FPSRHIGPRKTDVVAMLDTLGFKSLAELTE 66
            |||:||:.....:.:|....:..|...:       |..||:||..:||..||.|:|:..|....|
Yeast    32 SQSILLKTAATDITSTQYSRIFNPDLKNIDRPLDTFARRHLGPSPSDVKKMLKTMGYSDLNAFIE 96

  Fly    67 KAVPQSIQLKRELDLDKPLN---EHELIRRIRDISLKNQL-WRSYIGMGYHNCHVPHTIIRNMFE 127
            :.||.:|..:|.|.|:.|..   |.|:::.:..|:.||.. .:::||.||:...:|..|.||:.|
Yeast    97 ELVPPNILKRRPLKLEAPSKGFCEQEMLQHLEKIANKNHYKVKNFIGKGYYGTILPPVIQRNLLE 161

  Fly   128 NPGWTTQYTPYQPEIAQGRLESLLNYQTLVTDLTGLDVANASLLDEGTAAAEAMCLATRHNKRKK 192
            :|.|.|.||||||||:|||||:|||:||:|:|||||.|||||||||||||.|||.|:...:::||
Yeast   162 SPEWYTSYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAGEAMLLSFNISRKKK 226

  Fly   193 L--YLSNRVHPQTLSVVKTRTEALELEIVVGPIEQAD-------LPSRELAGILLQYPDTYGDV- 247
            |  .:..::|.||.||:.||.:...:||:  .::.:|       |.:.:::|.|:|||.|.|.: 
Yeast   227 LKYVIDKKLHQQTKSVLHTRAKPFNIEII--EVDCSDIKKAVDVLKNPDVSGCLVQYPATDGSIL 289

  Fly   248 --KDFEDIAALAKKNGTLVVVATDLLSLTLLRPPAEFGADIAVGTSQRLGVPLGYGGPHAGFFAC 310
              ...:.::.....:.:|:.||:||::||||:|||.:||||.:|:|||.|||:|||||||.|||.
Yeast   290 PPDSMKQLSDALHSHKSLLSVASDLMALTLLKPPAHYGADIVLGSSQRFGVPMGYGGPHAAFFAV 354

  Fly   311 KQSLVRLMPGRMIGVTRDMDGNDAYRLALQTREQHIRRDKATSNICTAQALLANMSAMYAIYHGP 375
            ...|.|.:|||::|:::|..|..|.|||||||||||:|||||||||||||||||:::.|.:||||
Yeast   355 IDKLNRKIPGRIVGISKDRLGKTALRLALQTREQHIKRDKATSNICTAQALLANVASSYCVYHGP 419

  Fly   376 EGLKAMANRIHHFTLTLQTGVL--GAGHEVINKNFFDTLHIRLGGGQSLEDLKERA-EHKRINLR 437
            :||:.::.||...|..|...:.  ...||:|||.:||||.|:||.|.|.|.|.::| :...|||.
Yeast   420 KGLQNISRRIFSLTSILANAIENDSCPHELINKTWFDTLTIKLGNGISSEQLLDKALKEFNINLF 484

  Fly   438 YLEDDTVGVALDETVSVADVDDLLWVFKAEASVEHILARKDVLKNSIENS---KFLRTSPYLQHP 499
            .::..|:.:|||||.:.|||::||.||..|.|       ...|.....||   :|.||...|::.
Yeast   485 AVDTTTISLALDETTTKADVENLLKVFDIENS-------SQFLSEDYSNSFPREFQRTDEILRNE 542

  Fly   500 IFQSYHSESRMVRYMKKLENKDISLVHSMIPLGSCTMKLNSTTEMMPCSFRHFTDIHPFAPVEQA 564
            :|..:|||:.|:||:.:|:::|:||.:|||||||||||||||.||||.::..|::||||.|..|.
Yeast   543 VFHMHHSETAMLRYLHRLQSRDLSLANSMIPLGSCTMKLNSTVEMMPITWPQFSNIHPFQPSNQV 607

  Fly   565 QGFHQMFKELEHDLCEITGYDRISFQPNSGAQGEYAGLRAIRSYHEHRNEGHRNICLIPISAHGT 629
            ||:.::...||.|||.|||:|.||.||||||||||.|||.||||.|.:.|.|||:||||:|||||
Yeast   608 QGYKELITSLEKDLCSITGFDGISLQPNSGAQGEYTGLRVIRSYLESKGENHRNVCLIPVSAHGT 672

  Fly   630 NPASAQMAGMKVEPIRILSNGSIDMAHLRAKAEEHAHELSCLMITYPSTMGVFEETVADICTLIH 694
            |||||.|||:||.|:..|.:||:|:..|:.|||:|:.||:.:|||||||.|:||..:.....::|
Yeast   673 NPASAAMAGLKVVPVNCLQDGSLDLVDLKNKAEQHSKELAAVMITYPSTYGLFEPGIQHAIDIVH 737

  Fly   695 KHGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPYLPGH 759
            ..|||||||||||||||||..|||.|:||.||||||||.||||||||...||.||:||.|:||.|
Yeast   738 SFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFSIPHGGGGPAGAPICVKSHLIPHLPKH 802

  Fly   760 PVVSPLS--SEEHSFGVVSAAPFGSSAILPISWSYIKLMGSRGLKRATQVAILNANYMSKRLEQH 822
            .||..::  ....|...||:||:|::.:||||::|||:||:.||..::.:|:||:|||..||:.|
Yeast   803 DVVDMITGIGGSKSIDSVSSAPYGNALVLPISYAYIKMMGNEGLPFSSVIAMLNSNYMMTRLKDH 867

  Fly   823 YKTLYKAPNSQL--VAHEFILDIRDLKKSANIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTE 885
            ||.|:....|.|  .|||||:|:|:. |:..:||:||||||.||||||||:::||.|||||||||
Yeast   868 YKILFVNEMSTLKHCAHEFIVDLREY-KAKGVEAIDVAKRLQDYGFHAPTLAFPVPGTLMIEPTE 931

  Fly   886 SEDKEELDRFCDAMISIREEIAEIEAGRMDKAVNPLKMSPHTQAQVI-SDKWD-RPYTREQAAFP 948
            ||:.|||||||||||||:|||..:.||:....:  ||.:||:...:| |..|| |.||||:||:|
Yeast   932 SENLEELDRFCDAMISIKEEINALVAGQPKGQI--LKNAPHSLEDLITSSNWDTRGYTREEAAYP 994

  Fly   949 AIFVKPDAKIWPTVGRIDDAYGDKHLVCTCPPI 981
            ..|::.: |.||||.|:||.|||.:|:||||.:
Yeast   995 LPFLRYN-KFWPTVARLDDTYGDMNLICTCPSV 1026

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3999NP_001262456.1 PRK05367 35..981 CDD:235432 506/980 (52%)
GDC-P 40..464 CDD:280502 210/442 (48%)
GcvP2 494..949 CDD:223935 267/460 (58%)
GCV2NP_013914.1 gcvP 70..1023 CDD:273089 502/965 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345366
Domainoid 1 1.000 387 1.000 Domainoid score I97
eggNOG 1 0.900 - - E1_COG1003
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H141
Inparanoid 1 1.050 965 1.000 Inparanoid score I34
Isobase 1 0.950 - 0 Normalized mean entropy S558
OMA 1 1.010 - - QHG62689
OrthoFinder 1 1.000 - - FOG0002904
OrthoInspector 1 1.000 - - oto100021
orthoMCL 1 0.900 - - OOG6_101195
Panther 1 1.100 - - LDO PTHR11773
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R482
SonicParanoid 1 1.000 - - X2723
TreeFam 1 0.960 - -
1615.740

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