DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3999 and gldc

DIOPT Version :9

Sequence 1:NP_001262456.1 Gene:CG3999 / 41253 FlyBaseID:FBgn0037801 Length:985 Species:Drosophila melanogaster
Sequence 2:XP_002934225.2 Gene:gldc / 100497481 XenbaseID:XB-GENE-1221322 Length:1024 Species:Xenopus tropicalis


Alignment Length:956 Identity:621/956 - (64%)
Similarity:757/956 - (79%) Gaps:7/956 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EVIFPTKSDFPSRHIGPRKTDVVAMLDTLGFKSLAELTEKAVPQSIQLKRELDLDKPLNEHELIR 92
            |::.|...||..|||||...:...||||||.:.:.||.:|.||.||:|.|.|.:|..:.|:|::.
 Frog    59 ELLLPRHDDFSERHIGPGDKEKREMLDTLGLQGIEELIDKTVPASIRLARPLKMDDQVCENEILE 123

  Fly    93 RIRDISLKNQLWRSYIGMGYHNCHVPHTIIRNMFENPGWTTQYTPYQPEIAQGRLESLLNYQTLV 157
            .::.|:.||::|||||||||:||.||..|:||:.||.||.|||||||||::||||||||||||:|
 Frog   124 SLQSIASKNKIWRSYIGMGYYNCSVPQAILRNLLENAGWVTQYTPYQPEVSQGRLESLLNYQTMV 188

  Fly   158 TDLTGLDVANASLLDEGTAAAEAMCLATRHNKRKKLYLSNRVHPQTLSVVKTRTEALEL--EIVV 220
            .|:||:||||||||||||||||||.|..|||||:|.|:.:|.||||::||:||...:.:  |:::
 Frog   189 CDVTGMDVANASLLDEGTAAAEAMQLCHRHNKRRKFYVDSRCHPQTIAVVQTRANYIGVVTELLL 253

  Fly   221 GPIEQADLPSRELAGILLQYPDTYGDVKDFEDIAALAKKNGTLVVVATDLLSLTLLRPPAEFGAD 285
             |.|. |...::::|:|.|||||.|:|:||..:...|.:||||...|||||:|.::|||.|||.|
 Frog   254 -PHEM-DFSGKDVSGVLFQYPDTNGNVEDFTHLVDRAHQNGTLACCATDLLALCIMRPPGEFGVD 316

  Fly   286 IAVGTSQRLGVPLGYGGPHAGFFACKQSLVRLMPGRMIGVTRDMDGNDAYRLALQTREQHIRRDK 350
            ||:|:|||.||||.||||||.|||.|::|||:|||||:|||||..|.:.||||||||||||||||
 Frog   317 IALGSSQRFGVPLCYGGPHAAFFAVKENLVRMMPGRMVGVTRDAAGKEVYRLALQTREQHIRRDK 381

  Fly   351 ATSNICTAQALLANMSAMYAIYHGPEGLKAMANRIHHFTLTLQTGVLGAGHEVINKNFFDTLHIR 415
            |||||||||||||||:||:.:||||.|||.:|.|:|:..:.|..|:..|||.:.|:.|||||.|.
 Frog   382 ATSNICTAQALLANMAAMFCVYHGPNGLKHIARRVHNAAIILAEGLTRAGHHLQNEMFFDTLKIH 446

  Fly   416 LGGGQSLEDLKERAEHKRINLRYLEDDTVGVALDETVSVADVDDLLWVFKAEASVEHILARKDVL 480
            .  |...:::.:||..::||||...|.::||:|||||...|:|||||||..|:|.|.:.......
 Frog   447 C--GCPTKEVLDRAAQRQINLRVYSDGSLGVSLDETVKEKDLDDLLWVFGCESSAELVAESMGEE 509

  Fly   481 KNSIENSKFLRTSPYLQHPIFQSYHSESRMVRYMKKLENKDISLVHSMIPLGSCTMKLNSTTEMM 545
            ...|..:.|.|||.:|.|.:|.|||||:.:|||||:||||||||||||||||||||||||::|:.
 Frog   510 TKGILGTAFKRTSKFLTHTVFNSYHSETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSSELT 574

  Fly   546 PCSFRHFTDIHPFAPVEQAQGFHQMFKELEHDLCEITGYDRISFQPNSGAQGEYAGLRAIRSYHE 610
            |.::..|.:||||.|::||||:.|:|:|||.|||||||||.||||||||||||||||.||::|..
 Frog   575 PITWSAFANIHPFVPLDQAQGYQQLFQELEKDLCEITGYDNISFQPNSGAQGEYAGLAAIKAYLN 639

  Fly   611 HRNEGHRNICLIPISAHGTNPASAQMAGMKVEPIRILSNGSIDMAHLRAKAEEHAHELSCLMITY 675
            .:.|.||.:||||.||||||||||||||||::|:.:..|||||:.||:|..::|...|:.:||||
 Frog   640 AKGEHHRTVCLIPKSAHGTNPASAQMAGMKIQPVEVDKNGSIDLVHLKAMVDKHRDHLAAIMITY 704

  Fly   676 PSTMGVFEETVADICTLIHKHGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGG 740
            |||.|||||.::|:|.||||:||||||||||||||||||||||||||||||||||||||||||||
 Frog   705 PSTNGVFEEDISDVCDLIHKNGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGG 769

  Fly   741 PGMGPIGVKAHLAPYLPGHPVVSPLSSEEHSFGVVSAAPFGSSAILPISWSYIKLMGSRGLKRAT 805
            |||||||||.|||||||.|||::..:....|.|.:||||:||||||||||:|||:||::|||.||
 Frog   770 PGMGPIGVKKHLAPYLPSHPVIALPNDNTASLGTISAAPWGSSAILPISWAYIKMMGAKGLKHAT 834

  Fly   806 QVAILNANYMSKRLEQHYKTLYKAPNSQLVAHEFILDIRDLKKSANIEAVDVAKRLMDYGFHAPT 870
            :||||||||||||||:|||.|:|.... .||||||||||..|||||||||||||||.||||||||
 Frog   835 EVAILNANYMSKRLEKHYKILFKGARG-FVAHEFILDIRPFKKSANIEAVDVAKRLQDYGFHAPT 898

  Fly   871 MSWPVAGTLMIEPTESEDKEELDRFCDAMISIREEIAEIEAGRMDKAVNPLKMSPHTQAQVISDK 935
            |||||||||||||||||||.||||||||||.||:|||:||.||||..:|||||:|||...:.|..
 Frog   899 MSWPVAGTLMIEPTESEDKAELDRFCDAMIGIRQEIADIEEGRMDSRINPLKMAPHTLTCIASSN 963

  Fly   936 WDRPYTREQAAFPAIFVKPDAKIWPTVGRIDDAYGDKHLVCTCPPI 981
            |||||:||.||||..||:|::|.|||:.||||.|||:||||||||:
 Frog   964 WDRPYSREVAAFPLPFVRPESKFWPTIARIDDIYGDQHLVCTCPPM 1009

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3999NP_001262456.1 PRK05367 35..981 CDD:235432 618/947 (65%)
GDC-P 40..464 CDD:280502 250/425 (59%)
GcvP2 494..949 CDD:223935 334/454 (74%)
gldcXP_002934225.2 PRK05367 62..1013 CDD:235432 620/953 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 493 1.000 Domainoid score I371
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H141
Inparanoid 1 1.050 1257 1.000 Inparanoid score I174
OMA 1 1.010 - - QHG62689
OrthoDB 1 1.010 - - D390348at2759
OrthoFinder 1 1.000 - - FOG0002904
OrthoInspector 1 1.000 - - oto104713
Panther 1 1.100 - - LDO PTHR11773
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2723
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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