DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42795 and RABGAP1L

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_001353375.1 Gene:RABGAP1L / 9910 HGNCID:24663 Length:1051 Species:Homo sapiens


Alignment Length:679 Identity:150/679 - (22%)
Similarity:237/679 - (34%) Gaps:224/679 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 SPTASGSGHAPSATAAADDEA-----------TSDYN----------------QWLHAMKLVARL 218
            :||:.|...:|.     ||||           |.|.:                :| |: .|.||.
Human   471 TPTSGGGPMSPQ-----DDEAEEESDNELSSGTGDVSKDCPEKILYSWGELLGKW-HS-NLGARP 528

  Fly   219 PG-------GTPPEFRRKLWLSLA---------DKYLKSKNVDWAQQREKCFCEEWREDDEELGI 267
            .|       |.|...|.::|..||         |:|......|.||:.                 
Human   529 KGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYRILITKDSAQES----------------- 576

  Fly   268 QIVKDLHRTGSNLCTGPA-------GSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMD 325
            .|.:|:||      |.||       |...|..|.:|...|:.|:.::|||||.:.|.|::|  :.
Human   577 VITRDIHR------TFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAVLL--LH 633

  Fly   326 KEEEESMKVMIYLVEGVLPTGYFYG-------SMGGLQADMGVFRELMQTRLPRLAKHLQRLQGP 383
            ..||::..|::.::       |.||       :...|.........|||.:||.|..|...|.  
Human   634 MPEEQAFCVLVKIM-------YDYGLRDLYRNNFEDLHCKFYQLERLMQEQLPDLHSHFSDLN-- 689

  Fly   384 VENAFEPPLTNVFTMQWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVISVR 448
            :|       .:::..|||||:|....|:..|..:.||:|.||.:::...||.|....:|.::.. 
Human   690 LE-------AHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDLLQA- 746

  Fly   449 SADEFYGKMGSYSSELLNGHLVDSNG--LIERVVKLG-PIEDLRQLRDKHLYNIAPLRHKQGLQL 510
               :|.|.:..:..:|...:..:.|.  |:|:...:. |.:.|::                    
Human   747 ---DFEGALKFFRVQLPKRYRAEENARRLMEQACNIKVPTKKLKK-------------------- 788

  Fly   511 YYDEEDTHSDEERLAVATVFGLNWGRRGSVGPAAAGKQQVEQKDRLALDISLLKKQYDRL-RERQ 574
             |::|.....|.:|                       ||.:..||...:...|::...|| :|..
Human   789 -YEKEYQTMRESQL-----------------------QQEDPMDRYKRENRRLQEASMRLEQEND 829

  Fly   575 KQAHVILTTACSTAARQGSGPASSSQPAVPVNQLLLGRPAIVTNKGKRVGAPLGAIPPARKPSLP 639
            ..||.::|:  ..|.|.....|......:....||..:..:.|.:.||           ::....
Human   830 DLAHELVTS--KIALRNDLDQAEDKADVLNKELLLTKQRLVETEEEKR-----------KQEEET 881

  Fly   640 AVLHTKPTSEKQLRRGETLLWRDTDPSRRRRDSLTWKEIKADRAAMIREGVDVSSVRTQKLRTRF 704
            |.|  |....|||.:.|                   .||| ...|:|.|...:.|    :|.||.
Human   882 AQL--KEVFRKQLEKAE-------------------YEIK-KTTAIIAEYKQICS----QLSTRL 920

  Fly   705 GKSDSSSYSE------------------DSDGEQESGTGGGGGSSTDTSLCDDDDPKSTEKSPKQ 751
            .|..::|..|                  ..:|..:....|......:|     ||.|.:.|  ||
Human   921 EKQQAASKEELEVVKGKMMACKHCSDIFSKEGALKLAATGREDQGIET-----DDEKDSLK--KQ 978

  Fly   752 KAKLARKLKEQK-QL--AGSRETSLERQR 777
            ..::..:|.:.| ||  |..:...||.||
Human   979 LREMELELAQTKLQLVEAKCKIQELEHQR 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 53/188 (28%)
DUF4682 560..689 CDD:464830 27/129 (21%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
RABGAP1LNP_001353375.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
PTB_Rab6GAP 129..257 CDD:269922
DUF3694 290..421 CDD:463599
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..503 10/36 (28%)
TBC 535..744 CDD:214540 65/249 (26%)
Smc <794..>1020 CDD:440809 59/283 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.