DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and AT3G07890

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_566323.1 Gene:AT3G07890 / 819980 AraportID:AT3G07890 Length:400 Species:Arabidopsis thaliana


Alignment Length:374 Identity:95/374 - (25%)
Similarity:158/374 - (42%) Gaps:88/374 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 HAMKLVARLPGGTPPEFRRKLWLSLADKYLKSKNV------DWAQQREKCFCEEWREDDEELGIQ 268
            :|:.|...:..|.||..|.|:|.||:....|...|      |..:..|.......|        |
plant   105 NAITLKRLIRKGIPPVLRPKVWFSLSGAAKKKSTVPESYYSDLTKAVEGMVTPATR--------Q 161

  Fly   269 IVKDLHRT--GSNLCTGPAGSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMDKEEEES 331
            |..||.||  |......|.|   .|.|:|:|:||:..:.:||||||.|.:.||:|.|| |.||::
plant   162 IDHDLPRTFPGHPWLDTPEG---HAALRRVLVGYSFRDSDVGYCQGLNYVAALLLLVM-KTEEDA 222

  Fly   332 MKVMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPPLTNVF 396
            ..::..|:|.||....:..::.|...:..||::|:..:..|:|.||:      :..|:   .::.
plant   223 FWMLAVLLENVLVRDCYTTNLSGCHVEQRVFKDLLAQKCSRIATHLE------DMGFD---VSLV 278

  Fly   397 TMQWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVISVRSADEFYGKMGSYS 461
            ..:|||.:|...||....|||||::..||:.||...||.::.:.|                    
plant   279 ATEWFLCLFSKSLPSETTLRVWDVLFYEGAKVLFHAALAIFKMKE-------------------- 323

  Fly   462 SELLNGHLVDSNGLIERVVKLGPIEDLRQLRDKHLYNIAPLRHKQGLQLYYDEEDTHSDEERLAV 526
            :|||..|            ::|.:.::.|.....|::                     .:|.|.|
plant   324 NELLMTH------------QVGDVINILQKTSHQLFD---------------------PDELLTV 355

  Fly   527 ATVFGLNWGRRGSVGPAAAGKQQVEQKDRLALDISLLKKQYDRLRERQK 575
            |      :.:.||:......||:.:|:..:..::....::.:.|:|..|
plant   356 A------FEKIGSMTTNTISKQRKKQEPAVMAELDQRLRRLNSLKESGK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 61/176 (35%)
DUF4682 560..689 CDD:464830 3/16 (19%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
AT3G07890NP_566323.1 TBC 113..327 CDD:214540 75/254 (30%)
Blue background indicates that the domain is not in the aligned region.

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