DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Tbc1d8

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:XP_006244913.1 Gene:Tbc1d8 / 680133 RGDID:1595491 Length:1150 Species:Rattus norvegicus


Alignment Length:678 Identity:150/678 - (22%)
Similarity:254/678 - (37%) Gaps:212/678 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 KLVARLPGGTPPEFRRKLWLSLADKY--LKSKNVDWAQQREK-----CFCEEWREDDEELGIQIV 270
            ||||.   |.|...|.:|||..:|..  |.|....:....|:     |...|          :|.
  Rat   515 KLVAM---GIPESLRGRLWLLFSDAVTDLASHPGYYGNLVEQSLGRCCLVTE----------EIE 566

  Fly   271 KDLHRTGSNLCTGPA--GSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMDKEEEESMK 333
            :||||   :|...||  .....|.|:|:|..||..||::||||..|:|.:::|  :..:|||:..
  Rat   567 RDLHR---SLPEHPAFQNETGIAALRRVLTAYAHRNPKIGYCQSMNILTSVLL--LYAKEEEAFW 626

  Fly   334 VMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPPLTNVFTM 398
            :::.:.|.:|| .||...:.|.|.|..||.||::..||.||:|:..|..         |.:: ::
  Rat   627 LLVAVCERMLP-DYFNHRVIGAQVDQSVFEELIKEHLPELAEHMSDLSA---------LASI-SL 680

  Fly   399 QWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVIS----------------- 446
            .||||:|.:.:|:...:.|.|....:|...:.:..|.:.....|.:.|                 
  Rat   681 SWFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQLGLAVLEANAEELCSSKDDGQALMILSRFLDH 745

  Fly   447 VRSAD------------------------------EFYGKMGSYSSE------------LLNGHL 469
            :::.|                              :.|.|.|:.|.|            :|.||.
  Rat   746 IKNEDSPGPPIGSHHAFFSDDQEPCPVTDIADLIRDSYEKFGNQSVEQIEHLRCKHRIRVLQGHE 810

  Fly   470 VDSNGLIERV----VKLGPIEDLRQLRD----KHLYNIAPLRHKQGLQLYYDEEDTHSDEERL-- 524
            ..:...:.||    |.:.| |||.:|.|    .|:.| ....|.:.:.|.:|....::::.|:  
  Rat   811 DTTKQNVLRVVIPEVSILP-EDLEELYDLFKRAHMMN-CYWEHHRPIALRHDPSRPYAEQYRIDA 873

  Fly   525 -AVATVFGLNWGRRGSVGPAAAGKQQ---VEQKDRLALD-----------ISLLKKQYD-RLRER 573
             ..|.:|.|       |.|...|...   .|:..||..|           :|.|...|: .:.|:
  Rat   874 CQFAHLFQL-------VSPWTCGAHTEILAERIFRLLDDNMDQLIEFKAFVSCLDVMYNGEMSEK 931

  Fly   574 QKQAHVI-LTTACSTAARQGSGP-----ASSSQPAVPVNQLLLGRPAIVTNKGKRVGAPLGAIPP 632
            .|..:.: :..|.:...|....|     .|:|:|      |:||||                   
  Rat   932 IKLLYRLHIPPALTENDRDSQSPLKNPLLSTSRP------LVLGRP------------------- 971

  Fly   633 ARKPSLPAVLHTKPTSEKQLRRGETLLWRDTDPSRRRRDSLTWKEIKADRAAMIREGVDVSSVRT 697
                                 .|:|:     |..::.:..:  |::..::..|.:|...:|    
  Rat   972 ---------------------NGDTI-----DYQKQLKQMI--KDLAKEKDKMEKELPKMS---- 1004

  Fly   698 QKLRTRFGKSDSSSYSEDSDGEQ-------------ESGTGGGGGSSTDTSLCDDDDPKSTEKSP 749
            |:...:|.|:..|.:.||.:...             :.|..|..|||:.:...:.::|::: ..|
  Rat  1005 QREFIQFCKTLYSMFHEDPEENDLYQAIATVTTLLLQIGEVGQRGSSSGSCSQECEEPQAS-APP 1068

  Fly   750 KQKAKLARKLKEQK---QLAGSRETSLE 774
            :|.:..|...|..:   :..|....|||
  Rat  1069 EQDSVFAEAGKSPQAFPETEGDWTVSLE 1096

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 55/176 (31%)
DUF4682 560..689 CDD:464830 21/135 (16%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Tbc1d8XP_006244913.1 PH-GRAM1_TBC1D8 171..269 CDD:270156
PH-GRAM2_TBC1D8 311..406 CDD:270160
TBC 520..726 CDD:214540 68/231 (29%)
Blue background indicates that the domain is not in the aligned region.

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