DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Sgsm1

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:XP_006535185.1 Gene:Sgsm1 / 52850 MGIID:107320 Length:1148 Species:Mus musculus


Alignment Length:1054 Identity:192/1054 - (18%)
Similarity:317/1054 - (30%) Gaps:363/1054 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 LVDS-----NGLIERVVKLGPIEDLRQLRDKHLYNIAPLRHK----------QGLQLYYDEEDTH 518
            |::|     .||.|.|.||..:.:|..|..|||:....|..:          :....||::|...
Mouse    97 LIESARNQIQGLQENVRKLPKLPNLSPLAIKHLWIRTALFERVLDKIVHYLVENSSKYYEKEALL 161

  Fly   519 SDE-ERLAVATVFGLNWGRRGSVGPAAAGKQQVEQKDRLALDISLLKKQYDRL--RERQKQAHVI 580
            .|. :...:|::.         |||.|....:::..|....|.|.     |.|  |.|...:|:.
Mouse   162 MDPVDGPILASLL---------VGPCALEYTKMKTADHFWTDPSA-----DELVQRHRIHSSHLR 212

  Fly   581 LTTACSTAA-----RQGSGPASSSQPAVPVNQ------------LLLGRPAIVTNKGKRVGAPLG 628
            ..:.....|     |..|| :...:|::....            ||.|:..::..          
Mouse   213 QDSPTKRPALCIQKRHSSG-SMDDRPSISARDYVESLHQNSRATLLYGKNNVLVQ---------- 266

  Fly   629 AIPPARKPSLPAVLHTKPTSEKQLRRGETLLWRDTDPSRRRRDSLTW-KEIKADRAAMIR----- 687
              |.....::|..|....|::..     ||.|............|.: |.:..|.|..||     
Mouse   267 --PRDDMEAVPGYLSLHQTADVM-----TLKWTPNQLMNGSVGDLDYEKSVYWDYAVTIRLEEIV 324

  Fly   688 -----EGVD-------VSSVRTQKLRTRFGKSDSSSYSEDSDGEQESGTGGGGGSSTDTSLCDDD 740
                 :.||       ||....|:...||.|                     ||.......|.::
Mouse   325 YLHCHQQVDSGGTVVLVSQDGIQRPPFRFPK---------------------GGHLLQFLSCLEN 368

  Fly   741 --------DPKSTEKSPKQKAKLARKLKEQKQLAGSRETSLERQRPKSWAPSSHEIPFMLMGTDS 797
                    ||...  |.:.|.|:..||:::.....|..||                         
Mouse   369 GLLPHGQLDPPLW--SQRGKGKVFPKLRKRSPQGSSESTS------------------------- 406

  Fly   798 GDEKEDKSTKEGPITGDQAED-------SATESGHYEFDRELHLVSSKMEPLKLPFDPEFTGMTS 855
             .:|||          |:|.|       ..|:|.....|    |:.|   |..:...|.:..:. 
Mouse   407 -SDKED----------DEATDYVFRIIYPGTQSEFVALD----LMGS---PRPVSIGPAWMMLA- 452

  Fly   856 VSPIPTPREKSEAEEDLLDERKPFDVSDDGVTNQYFERVNSVERPNRLELTYSLNEEETDTNAIY 920
                        |.:.:|...|..         |:.:....:..|.|                 .
Mouse   453 ------------AGQSMLVVAKGL---------QWAQTRGCLTIPTR-----------------S 479

  Fly   921 LEEREKVEGHSGDREYNSLPPFY---PRE------NDDGVQGGGKVPQIRDDNIPGENKDDYKEL 976
            ::|:..:.....|...|:|||.:   ||:      :..|...||.......:..|       .:|
Mouse   480 VKEQPPMPQDLMDVSMNNLPPLWQPSPRKSSCSSCSQSGSADGGSTNGCNHERAP-------LKL 537

  Fly   977 LSMTIEENTVYKPPTPTASTLSNASRKRRDPRRKTLTRS-----------STIEIEERYQALERR 1030
            |.    :|..|                      :.|:|:           ||:............
Mouse   538 LC----DNMKY----------------------QILSRAFYGWLAYCRHLSTVRTHLSALVNHMI 576

  Fly  1031 ISQDQPSGDRQA-------KYIPSTAALEER-------FNTLEKQL---------------SAEK 1066
            :|.|.|....|.       |||..:....|:       :..::.::               ..|.
Mouse   577 VSPDLPCDAGQGLTASIWEKYIQDSTTYPEQELLRLIYYGGVQPEIRRAVWPFLLGHYQFGMTEM 641

  Fly  1067 QRKELSE-MEAEYP------IKSERIPSTADLESRFNSLTKQMSSSESSSKTPIDLKDEDRPSGS 1124
            :|||:.| :.|.|.      :..|.|....:.||...:|.|..|.:...|.....|..:...|..
Mouse   642 ERKEVDEQIHACYAQTMSEWLGCEAIVRQRERESHAAALAKCSSGASLDSHLHRMLHRDSTISNE 706

  Fly  1125 SSKNQKDSEKTSKLHKSEEPESNTKETTGETEASDSNDSKIGEKETEQPRIKKLPSTAELEDRFN 1189
            ||::.....:..:|.......:...|:..|.|.:::.    |..|.:.|   |:|:.        
Mouse   707 SSQSCSSGRQNLRLQSDSSSSTQVFESVDEVEQTEAE----GRSEEKHP---KIPNG-------- 756

  Fly  1190 ALERKMSVQKSSPSKNKKEPPDEEESKSTKEPEEPEESEKANEKTSGRQTPIAKK--DSKDSDQK 1252
                  :....:.|.:...|.....|....|..||..|.:.:...:.|..|...:  ||...|.:
Mouse   757 ------NPANGTCSPDSGHPSSHNFSSGLSEHSEPSLSTEDSVLDAQRSLPAVFRPGDSSVEDGQ 815

  Fly  1253 KSETKENQSPTKNQDEKVKVKSPKSEEMIEKETSSNPKEDSHESEAATNKKVEGNRELSSEKG-- 1315
            .||.      |.::||     :|:.|..:         :||.||:...|:.:|   |..|..|  
Mouse   816 SSEA------TTSRDE-----APREELAV---------QDSLESDLLANESLE---EFMSIPGSL 857

  Fly  1316 DHKIKEKS----EEAPGKAGKETAETKNANVKDSSKKGDSQKNEAAKTSVSQTESDLKPSSKENS 1376
            |..:.||.    :..||:|             |...:.||:.|.:.:..:    ..|.|:....:
Mouse   858 DVALPEKDGAVMDGWPGEA-------------DKPSRADSEDNLSEEPEM----ESLFPALASLA 905

  Fly  1377 TSKDAEQEKTPRKS 1390
            .:..|..|.:|..|
Mouse   906 VTSSANNEASPVSS 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855
DUF4682 560..689 CDD:464830 27/158 (17%)
PTZ00121 <1112..2009 CDD:173412 57/287 (20%)
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Sgsm1XP_006535185.1 RUN_SGSM1 20..196 CDD:439065 25/107 (23%)
PH_RUTBC 254..425 CDD:275431 43/246 (17%)
TBC <936..1105 CDD:214540
Blue background indicates that the domain is not in the aligned region.

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