DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Tbc1d13

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_001386383.1 Gene:Tbc1d13 / 499768 RGDID:1591937 Length:400 Species:Rattus norvegicus


Alignment Length:235 Identity:42/235 - (17%)
Similarity:86/235 - (36%) Gaps:86/235 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 LKRILLGYARYNPEVGYCQGFN-MLGA---------------------------LILQVMD---K 326
            ::|||..||:.||.:.|.||.| ::|.                           |:.::.|   |
  Rat   211 VERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKEHAEADTFFCFTNLMAEIRDNFIK 275

  Fly   327 EEEESMKVMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPP 391
            ..::|...:.|.:|.|      |.::  .:.|:.::.:|.                  |.:.:| 
  Rat   276 SLDDSQCGITYKMEKV------YSTL--KEKDVELYLKLQ------------------EQSIKP- 313

  Fly   392 LTNVFTMQWFLTMFCTCLPMSCVLRVWDLVLIEGS--DVLLRTALVLWSLLEERVISVRSADEFY 454
              ..|..:|...:......:..|:|:||.:..:|:  |.||.....:..|:.|:::.        
  Rat   314 --QFFAFRWLTLLLSQEFLLPDVIRIWDSLFADGNRFDFLLLVCCAMLILIREQLLK-------- 368

  Fly   455 GKMGSYSSELLNGHLVDSNGLIERVVKLGPIEDLRQLRDK 494
               |.::..:             |:::..||.|:.::..|
  Rat   369 ---GDFTVNM-------------RLLQDYPISDVCKILQK 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 35/182 (19%)
DUF4682 560..689 CDD:464830
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Tbc1d13NP_001386383.1 TBC 32..367 CDD:214540 36/184 (20%)
Blue background indicates that the domain is not in the aligned region.

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