DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42795 and plx

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_001163511.1 Gene:plx / 40704 FlyBaseID:FBgn0261261 Length:1572 Species:Drosophila melanogaster


Alignment Length:852 Identity:169/852 - (19%)
Similarity:294/852 - (34%) Gaps:278/852 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 HAMKLVARLPGGTPPEFRRKLWLSLADKYLKSKNVDWAQQREKCF----------CEEWREDDEE 264
            ||::.      |.|...|..:|..||:::    :::.|....|.|          .:...|....
  Fly   931 HAIRT------GVPRSKRGDVWTFLAEQH----SMNTAPVDTKRFPNFNTPYHMLLKHLTEHQHA 985

  Fly   265 LGIQIVKDLHRTGSN--LCTGPAGSINQAKLKRILLGYARYNPEVGYCQGFNML-GALILQVMDK 326
            :.|    ||.||..|  ....|.| :.|..|..:|..|:..:||:|||||...: |.|:|..   
  Fly   986 IFI----DLGRTFPNHQFYKDPLG-LGQLSLFNLLKAYSILDPELGYCQGLGFICGVLLLHC--- 1042

  Fly   327 EEEESMKVMIYLV-EGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAK-HLQRLQGPV-ENAF 388
            :|..|.:::.:|: ...:.|.|.        .||..| :|...:|.||.| ||..|...: :|..
  Fly  1043 DEANSFQLLKHLMFRRNMRTKYL--------PDMKKF-QLQLYQLSRLVKDHLPDLYVWLDQNDV 1098

  Fly   389 EPPLTNVFTMQWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVISVRSADEF 453
            .|.|   :...|.||:|.:..|:..|.||:||:.:|.|||:.:.|:.|.|:.::::::..:.:|.
  Fly  1099 SPTL---YAAPWILTVFSSQFPLGFVARVFDLLFLESSDVIFKFAIALLSVHKQQLLAKDNFEEI 1160

  Fly   454 YGKMGSYSSELLNGHLVDSNGLIERVVKLGPIEDLRQLRDKHLYNIAPLRHKQGLQLYYDEEDTH 518
            ...:.:...::       .:..:|:::||                                    
  Fly  1161 MDYLKTVVPKM-------EHTCMEQIMKL------------------------------------ 1182

  Fly   519 SDEERLAVATVFGLNWGRRGSVGPAAAGKQQVEQK---DRLALDISLLKKQYDRL-RERQKQAHV 579
                      ||.::           .|||..|.|   :.|..:|:......:.| ||:.:..|:
  Fly  1183 ----------VFSMD-----------IGKQLAEYKVEYNVLQEEITTTNHHLEMLNREKTQNQHL 1226

  Fly   580 --ILTTACSTAARQGSGPASSSQPAVPVNQLLLGRPAIVTNKGKRVGAPLGAIPPARKPSLPAVL 642
              .|..|.|:.|:..:..:|.......:...:......:...|:.||..:...|....|:     
  Fly  1227 EQQLQFAQSSIAQLETTRSSQQAQITTLQSQVQSLELTIQTLGRYVGQLVEHNPDLELPN----- 1286

  Fly   643 HTKPTSEKQLRRGETLLWRDTDPSRRRRDSLTWKEIKADRAAMIREGVDVSSVRTQKLRTRFGKS 707
                    ::||   :|.:..|..|:||     |.|..:|  .|.:.|.|:|.....|:..    
  Fly  1287 --------EVRR---MLQQLDDLDRQRR-----KPIFTER--KIGKSVSVNSHLGFPLKVL---- 1329

  Fly   708 DSSSYSEDSDGEQESGTGGGGGSSTDTSLCDDDDPKSTEKSPKQKAKLARKLKEQKQ---LAGSR 769
                                      ..|.:.|:..|.:|..|:|.....:|::|:|   |.|..
  Fly  1330 --------------------------EELTERDELGSPQKQKKEKTPFFEQLRQQQQQHRLNGGG 1368

  Fly   770 ETSLERQRPKSWAPSSHEIPFMLMGTDSGDEKEDKSTKEGPITGDQAEDSATESGHYEFDRELHL 834
            ::|   ...:|.:|:....|..|:  |:...:.....|...:...:..|.              .
  Fly  1369 QSS---NVGESGSPTPPSRPNRLL--DNASARTVMQVKLDELKLPEHVDK--------------F 1414

  Fly   835 VSSKMEPLKL------PFDPEFT-------------GMTSVSPIPTPREKSEAEEDLLDERKPFD 880
            |::...||::      |..|..|             |..:..|..:|          |.:|:.:.
  Fly  1415 VANIKSPLEVDSGVGTPLSPPSTASNSSGGSIFSRMGYRTTPPALSP----------LAQRQSYG 1469

  Fly   881 VSDDGVTN----QYFERV-----------NSVERPNRLELTYSLNEEETDTNAIYLEEREKVEGH 930
            |:   :|.    |:.|.|           ..||.|..:   :.|:....|.|..:          
  Fly  1470 VA---ITTAPCPQHMEEVAPATTMAVMPQEDVEEPQPM---HPLSMVGGDVNVRF---------- 1518

  Fly   931 SGDREYNSLPPFY-----PRENDDGVQGGGKV-PQIRDDNIPGENKDDYKELLSMTIEENTVYKP 989
            .|..:..|:.|.:     |.   .|||..... |.:|...:|.|                  ..|
  Fly  1519 KGTTQLKSIRPVHHMRAIPL---GGVQHPSSTEPAVRVAPVPVE------------------LAP 1562

  Fly   990 PTPTAST 996
            |..||:|
  Fly  1563 PAATATT 1569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 57/180 (32%)
DUF4682 560..689 CDD:464830 26/131 (20%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
plxNP_001163511.1 PTB_TBC1D1_like 301..601 CDD:269967
DUF3350 831..880 CDD:463365
TBC 933..1152 CDD:214540 68/248 (27%)
COG4372 <1190..>1353 CDD:443500 41/215 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.