DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Tbc1d2

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:XP_006538109.1 Gene:Tbc1d2 / 381605 MGIID:2652885 Length:923 Species:Mus musculus


Alignment Length:599 Identity:140/599 - (23%)
Similarity:225/599 - (37%) Gaps:177/599 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YGRQEVLAKRIRRCCRDPVHKRSPKKKKGQLAQLASGMVGD-RSSLERLDVRK------------ 67
            :.:|:|:.|..::...|             |||.|....|| .|..||::..|            
Mouse   416 HAKQQVICKLTQKLTED-------------LAQPADATNGDFLSQQERMEHLKDDMEAYRTQNRF 467

  Fly    68 ---------------------LIDVCAILKVEILMLGYLLERVLVARDRLQR--------HQEVL 103
                                 |:..||.|:.....:.   .:.|....|||.        ..|:|
Mouse   468 LNSEIHQVTKIWRKVAEKEKALLTKCAYLQARNCQVE---SKYLAGLRRLQEAAGAEAGDFPELL 529

  Fly   104 CEFVTAVLIVESDDAQPKMRFSLSPPPQ-----------------KAITSARLTSPTKNSLSSNN 151
            .:.:...|..|:.:|.   ...|||..:                 |.:...:......:.|.::.
Mouse   530 QQLIQEALQWEAGEAD---SVGLSPVSEYDDYGFLTVPDYEMEDLKLLAKIQALEVRSHHLLAHE 591

  Fly   152 TITTPGSNNRSPSSTKTTMLTRNGGGHGTSPTASGSGHAPSATAAADDEATSDYNQWLHAMKLVA 216
            .:..| ..:|..:.|:.|                     |||          :..|.|.|     
Mouse   592 AVERP-LRDRWATLTELT---------------------PSA----------ELKQLLRA----- 619

  Fly   217 RLPGGTPPEFRRKLWLSLADKYLKSKNVDWAQQREKCFCE---EWREDDEELGIQIVKDLHRT-- 276
                |.|.|.|.::|..|..:.::.      .|...|:.|   ..|..:.....||..||:||  
Mouse   620 ----GVPREHRPRVWRWLVHRRVRH------LQAPGCYQELLARGRACEHPAARQIELDLNRTFP 674

  Fly   277 GSNLCTGPAGSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMDKEEEESMKVMIYLVEG 341
            .:...|.|..|... ||:|:||.::..||.:|||||.|.|.|:.|.|:: :||.:...::.:||.
Mouse   675 TNKHFTCPTSSFPD-KLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLE-DEESAFWCLVAIVET 737

  Fly   342 VLPTGYFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPPLTNVFTMQWFLTMFC 406
            :||..|:..::...|.|..|.::|:..:||||..||.  |..|:       .::.|..|||.:|.
Mouse   738 ILPAEYYSKTLTASQVDQRVLQDLLSEKLPRLTAHLG--QHRVD-------LSLITFNWFLVVFA 793

  Fly   407 TCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVISVRSADEFYGKMGSY------SSELL 465
            ..|....:|||||..|.||:.|:.|.||.::...||.::.::.:.|.|..:..:      |.:|:
Mouse   794 DSLISDILLRVWDAFLYEGTKVVFRYALAIFKYNEEAILQLQDSLEIYQYLRFFTKTICDSRKLM 858

  Fly   466 NGHLVDSNGLIERVVKLGPIEDLRQLRDKHLYNI-APLRHKQGLQLYYDEEDTHSDEERLAVATV 529
            :....|.|..        |::.|||||..|...: |.||..:.|::.|.:               
Mouse   859 SIAFNDMNPF--------PMKQLRQLRAAHRERLEAELRELELLKVEYLQ--------------- 900

  Fly   530 FGLNWGRRGSVGPA 543
                  ||.|:|.|
Mouse   901 ------RRASLGRA 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 64/176 (36%)
DUF4682 560..689 CDD:464830
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Tbc1d2XP_006538109.1 PH_TBC1D2A 45..146 CDD:269966
PRK12323 <192..404 CDD:481241
COG4913 <307..>464 CDD:443941 14/60 (23%)
TBC 620..832 CDD:214540 75/228 (33%)
Blue background indicates that the domain is not in the aligned region.

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