DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Tbc1d10b

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_001102391.1 Gene:Tbc1d10b / 365372 RGDID:1309191 Length:795 Species:Rattus norvegicus


Alignment Length:876 Identity:173/876 - (19%)
Similarity:272/876 - (31%) Gaps:339/876 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 TAVLIVE-SDDAQPKMRFSLSPPPQKAITSARL---TSPTKNSLSSNNTITTPGSNNRSPSSTKT 168
            |..|.:| |.:|.....|........|.||..|   |...|...:..:.:..||:..|:||.|.:
  Rat    81 TVELTLEASPEAAKTQEFPAPAAEAGAETSVALVLGTDTPKTEEARASPVPGPGTPTRTPSRTAS 145

  Fly   169 TMLT-------------------RNG-----GGHGTSPTAS------------------------ 185
            ..||                   |.|     ||||.:.:||                        
  Rat   146 GALTAKPPLAPKPGTTVASGVTARGGAGQVAGGHGAATSASAGPVPEDPSGPVTGPPGTCEASAP 210

  Fly   186 -------------------GS------------GHAPSATAAADD-------------------- 199
                               ||            |.||...:..|.                    
  Rat   211 VARVTVTPAPETTENFQDLGSTSSLGPGISGPRGQAPDTLSYLDSVSLMSGTLESLTDDVSSVGS 275

  Fly   200 --------------------------------------------EATSDYNQWL--HAMKLVARL 218
                                                        |..|::::||  ...|:..|.
  Rat   276 DSEINGLALRKTDKYGFLGGSQYSGSLESSIPVDVARQRELKWLEMFSNWDKWLSRRFQKVKLRC 340

  Fly   219 PGGTPPEFRRKLWLSLADKYLKSKNVDWAQQREKCFCEEWREDDEELGIQIV-KDLHRT-GSNLC 281
            ..|.|...|.|.|     :|| |.:.:..:|....|.|..|...:...:.:: |||||. ..:..
  Rat   341 RKGIPSSLRAKAW-----QYL-SNSKELLEQNPGKFEELERAPGDPKWLDVIEKDLHRQFPFHEM 399

  Fly   282 TGPAGSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMDKEEEESMKVMIYLVEGVLPTG 346
            ....|...|..|.|||..|..|.|:.||||....:.|::|  |....|::...::.:.:..|| |
  Rat   400 FAARGGHGQQDLYRILKAYTIYRPDEGYCQAQAPVAAVLL--MHMPAEQAFWCLVQICDKYLP-G 461

  Fly   347 YFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPPLTNVFTMQWFLTMFCTCLPM 411
            |:...:..:|.|..:|..|::...|...:||:|      ...:|.|   :..:||:.:|...||.
  Rat   462 YYSAGLEAIQLDGEIFFALLRRASPLAHRHLRR------QRIDPVL---YMTEWFMCIFARTLPW 517

  Fly   412 SCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVISVRSADEFYGKMGSYSSELLNGHLVDSNGLI 476
            :.||||||:...||..::.|.||||.......|..:||....|..|....:  |....:..:.|:
  Rat   518 ASVLRVWDMFFCEGVKIIFRVALVLLRHTLGSVEKLRSCQGMYETMEQLRN--LPQQCMQEDFLV 580

  Fly   477 ERVVKLGPIEDLRQLRDKHLYNIAPLRHKQGLQLYYDEEDTHSDEERLAVATVFGLNWGRRGSVG 541
            ..|..|...|.|  :..::...:...|..:|...|......|                       
  Rat   581 HEVTTLPVTEAL--IERENAAQLKKWRETRGELQYRPSRRLH----------------------- 620

  Fly   542 PAAAGKQQVEQKDRLALDISLLKKQYDRLRERQKQAHVILTTACSTAARQGSGPASSSQPAVPVN 606
                |.:.:.:                   ||::|...:             ||:||        
  Rat   621 ----GSRAIHE-------------------ERRRQQPPL-------------GPSSS-------- 641

  Fly   607 QLLLGRPAIVTNKGKRVGAPLGAIPPARK-----------------PSLPAVLHTKPT------- 647
              ||..|::.:...:.||......||.|:                 ||||:     ||       
  Rat   642 --LLSLPSLKSRGSRAVGGAPSPPPPVRRASAGPVPGAVVIAEGLHPSLPS-----PTGNSTPLG 699

  Fly   648 SEKQLRRGETLLWRDTDPSRRRRDSLTWKEIKADRAAMIREGVDVSSVRTQKLRTRFGKSDSSSY 712
            :.|::||.|        ..|::::    ||.:.:|....:|     ..:.:|.|.::.|      
  Rat   700 TSKEIRRQE--------KERQKQE----KEREKERQRQEKE-----REKQEKERQKWEK------ 741

  Fly   713 SEDSDGEQESGTGGGGGSSTDTSLCDDDDPKSTEKSPKQKAKLARKLKEQKQLAGSRETSLERQR 777
                  |||                     |..:|..|::.||.:|       ...|:.||.|:.
  Rat   742 ------EQE---------------------KEQQKQEKERQKLEKK-------GQGRKLSLRRKA 772

  Fly   778 PKSWAPSSHEIPFMLMGTDSGDEKEDKSTKE 808
            ....||.           |.||....::.::
  Rat   773 DGPPAPQ-----------DGGDRSAAEARQD 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 54/176 (31%)
DUF4682 560..689 CDD:464830 29/152 (19%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Tbc1d10bNP_001102391.1 PHA03247 <5..223 CDD:223021 28/141 (20%)
TBC 340..545 CDD:214540 66/222 (30%)
Blue background indicates that the domain is not in the aligned region.

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