DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Grtp1

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_001163948.1 Gene:Grtp1 / 361180 RGDID:1309210 Length:342 Species:Rattus norvegicus


Alignment Length:252 Identity:74/252 - (29%)
Similarity:119/252 - (47%) Gaps:27/252 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 GTPPEFRRKLWLSLADKYLK-SKNVDWAQQREKCFCEEWREDDEELGIQIVKDLHRT--GSNLCT 282
            |.|.|.|.::|::::....: .:|..:..:..:      .|....|...|..||:||  .:.:..
  Rat    74 GIPLEHRARVWMAVSGAQAQMDQNPGYYHRLLE------GESSSRLEEAIRTDLNRTFPDNVMFR 132

  Fly   283 GPAGSINQAKLKRILLGYARYNPEVGYCQGFNML-GALILQVMDKEEEESMKVMIYLVEGVLPTG 346
            ..|....|..|..:||.|..:|.:||||||.|.: |.|||  :.|.||||..::..||..:|| .
  Rat   133 KTADPCLQKTLYNVLLAYGLHNQDVGYCQGMNFIAGYLIL--ITKNEEESFWLLDALVGRILP-D 194

  Fly   347 YFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPPLTNVFTMQWFLTMFCTCLPM 411
            |:..:|.||:.|..|..||::.:||.:|..:..         ...|..:...:||:.:|...||:
  Rat   195 YYSPAMLGLKTDQEVLAELVRMKLPAVAALMDG---------HGVLWTLLVSRWFICLFVDILPV 250

  Fly   412 SCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVISVRSADEFYGKM-----GSYSSE 463
            ..|||:||.:..|||.::.|.||.|....:|.::...|..:...|.     |.:.:|
  Rat   251 ETVLRIWDCLFNEGSKIIFRVALTLIKQHQEFILEASSVPDICDKFKQITKGDFVTE 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 61/177 (34%)
DUF4682 560..689 CDD:464830
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Grtp1NP_001163948.1 TBC 71..284 CDD:214540 70/227 (31%)
Blue background indicates that the domain is not in the aligned region.

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