DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Tbc1d30

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:XP_038936067.1 Gene:Tbc1d30 / 299824 RGDID:1305255 Length:946 Species:Rattus norvegicus


Alignment Length:952 Identity:277/952 - (29%)
Similarity:408/952 - (42%) Gaps:254/952 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SETKKLLDALLCDIYG--RQEVLAKRIRRCCRDPVHK---RSPKKKKGQLAQLASGMVGD----- 56
            |.|..|:..||.::|.  .:|.:|....|....|:.|   .|..:..|....|.....||     
  Rat   103 SRTASLVSGLLTELYSCTEEEDVAAGGDRSQGRPLRKDSLDSSTETSGSDVFLGGRGAGDSRVLQ 167

  Fly    57 ----RSS-------LERLDVRKLIDVCAILKVEILMLGYLLERVLVARDRLQRHQEVLCEFVTAV 110
                |.|       |||.|..:|..:...||..:.:....|.|.|..:|||....:..|:.|||.
  Rat   168 ELRERPSLRLQMQYLERKDSSELKTILRELKSRVGIQSAKLLRQLKQKDRLLHKVQKNCDIVTAC 232

  Fly   111 L--IVESDDAQPKMRFSLSPPPQKAITSARLTSPTKNSLSSNNTITTPGSNNRSPSSTKTTMLTR 173
            |  :.:......|::|:|.|                                         .|.:
  Rat   233 LQAVSQKRRVDTKLKFTLEP-----------------------------------------SLGQ 256

  Fly   174 NGGGHGTSPTASGSGHAPSATAAADDEATSDYNQWLHAMKLVARLPGGTPPEFRRKLWLSLADKY 238
            ||                             :.||..|:|.||||..|.|.|:|||:||:|||.|
  Rat   257 NG-----------------------------FQQWYDALKAVARLSTGIPKEWRRKVWLTLADHY 292

  Fly   239 LKSKNVDWAQQREKCFCEEWREDDEELGIQIVKDLHRTGSNLCTGPAGSINQAKLKRILLGYARY 303
            |.|..:||.:.....|.|....||:.:||||||||||||.:...|.....::..|||:||.|||:
  Rat   293 LHSIAIDWDKTMRFTFNERSNPDDDSMGIQIVKDLHRTGCSSYCGQEAEQDRVVLKRVLLAYARW 357

  Fly   304 NPEVGYCQGFNMLGALILQVMDKEEEESMKVMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQT 368
            |..||||||||:|.||||:||:..|.:::|:||||::.|||..||..::..|..||.|||:|::.
  Rat   358 NKNVGYCQGFNILAALILEVMEGNEGDALKIMIYLIDKVLPESYFVNNLRALSVDMAVFRDLLRL 422

  Fly   369 RLPRLAKHLQRLQGPVE----NAFEPPLTNVFTMQWFLTMFCTCLPMSCVLRVWDLVLIEGSDVL 429
            :||.|::||..||....    ..:|||||||||||||||:|.||||...||::||.|..|||:::
  Rat   423 KLPELSQHLDTLQRTSNKESGGGYEPPLTNVFTMQWFLTLFATCLPNHTVLKIWDSVFFEGSEII 487

  Fly   430 LRTALVLWSLLEERVISVRSADEFYGKMGSYSSELLNGHLVDSNGLIERVVKLG--PIEDLRQLR 492
            ||.:|.:|:.|.|::....:||||||.||..:.|:|...|:.|:.|::.|..:.  |...|.:||
  Rat   488 LRVSLAIWAKLGEQIECCETADEFYGTMGRLTQEMLEHDLLQSHELMQTVYSMAPFPFPQLAELR 552

  Fly   493 DKHLYNIAPL-----------RHKQGLQLYYDEEDTHSDEERLAVATVFGLNWGRRGSVGPAA-- 544
            :|:.|||.|.           ||.:...  .|:|:...||:.:|.|.         |.:||.:  
  Rat   553 EKYTYNITPFPATIKPTSVSGRHSKSRD--SDDENGPDDEDAVASAV---------GCLGPLSGL 606

  Fly   545 -AGKQQVEQK----------------------------------------DRLALDISLLKKQYD 568
             |.:.|..||                                        :|:..||:.||:||.
  Rat   607 LAPELQKYQKQIKEGTEEQTLRSNNIAELSPGAINSCRSEYHAAFNSMMTERMTTDINALKRQYS 671

  Fly   569 RLRER-QKQAHVILTTACSTAARQGSGPASSSQPAVP-----VNQLLLGRPAIVTNKGKR----- 622
            |:::: |:|.|.:.       .|...||.:|..|:..     :|.||||:...:||:..:     
  Rat   672 RIKKKQQQQLHQVY-------IRADKGPVTSILPSQANSSPVINHLLLGKKMKITNRAAKNAVIH 729

  Fly   623 -VGAPLGAIPPARKPSLPAVL----------HTK--PTSEKQLRRGET--LLWRDTD-------- 664
             .|...|.|.|.....:...|          |.|  |.::..|..|:|  |:....:        
  Rat   730 MPGHAGGKISPVPYEDIKTKLNSPWRTHIRVHKKNMPRTKSHLGCGDTVGLIEEQNEGCKTSSLG 794

  Fly   665 -----PSR---------RRRDSLTWKEIKADRAAMI--REGVDVSSVRTQKLRTRFGKSDSSSYS 713
                 ||.         ...||:|.:.|:......:  ...|||::|:.:.......:.|:::.:
  Rat   795 AAEEFPSSCAVTAQSEGSSGDSVTPRTIEGQSPEPVFGDADVDVTAVQVKLEALELNQRDTTAET 859

  Fly   714 E-----------DSDGEQESGTGGGGGSSTDTSLCDDDDPKSTEKSPKQKAKLARKLKEQKQLAG 767
            |           |:.||.::.:....||::...:.   .|..:.| |.:|:..||.|    .|.|
  Rat   860 ESKGQRHAPELVDAPGENQTVSKSLPGSNSKPPIF---SPFPSVK-PLRKSATARNL----GLYG 916

  Fly   768 SRETSLERQRPKSWAPSSHEIPFMLMG-TDSGDEKEDKSTKE 808
                      |....|:.| .|.|..| :.||  ....|||:
  Rat   917 ----------PTERTPTMH-FPQMSRGFSKSG--MGSSSTKK 945

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 93/178 (52%)
DUF4682 560..689 CDD:464830 39/178 (22%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Tbc1d30XP_038936067.1 TBC 273..494 CDD:214540 113/220 (51%)
DUF4682 663..791 CDD:464830 33/134 (25%)
Blue background indicates that the domain is not in the aligned region.

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