DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Tbc1d17

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_001099728.1 Gene:Tbc1d17 / 292886 RGDID:1309686 Length:646 Species:Rattus norvegicus


Alignment Length:393 Identity:93/393 - (23%)
Similarity:147/393 - (37%) Gaps:111/393 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 GTSPTASGSGHAPSATAAADDEATSDYNQWLHAMKLVARL-PGGTPPEFRRKLWLSL-------- 234
            |..||..   .||..|....:.......:..:..:|.:|: .||..|..||:.|..|        
  Rat   271 GQRPTVE---RAPPVTEEEWNRHVGPEGRLQNVPELKSRIFSGGLSPGLRREAWKFLLGYLSWES 332

  Fly   235 ------------ADKY----LKSKNVDWAQQREKCFCEEWREDDEELGIQIVKDLHRTG--SNLC 281
                        .|:|    |:.|:|...|:|.......:|.       .|.:|:.||.  :...
  Rat   333 SAEEHKAHVRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRS-------LIERDVSRTDRTNKFY 390

  Fly   282 TGP----AGSINQAKLKRILLGYARYNPEVGYCQGFNMLGALILQVMDKEEEESMKVMIYLVEGV 342
            .||    .|.:|.     |||.|..|:.::||.||.:.|.:.||.|:..|.:.            
  Rat   391 EGPENPGLGLLND-----ILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDA------------ 438

  Fly   343 LPTGYFYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPPLTN----------VFT 397
                 |:...|.::...|.|.|..:|...:|.:.|..|:     ..:.||.:          .|.
  Rat   439 -----FWCFCGFMELVHGNFEESQETMKRQLGQLLLLLR-----VLDQPLCDFLDSQDSGSLCFC 493

  Fly   398 MQWFLTMFCTCLPMSCVLRVWDLVL--IEGSDVLLRTALVLWSLLE-ERVISVRSADEFYGKMGS 459
            .:|.|..|....|...|||:|:::.  :.|.::.|   ||..::|: ||...:.|        |.
  Rat   494 FRWLLIWFKREFPFPDVLRLWEVLWTGLPGPNLHL---LVACAILDMERDTLMLS--------GF 547

  Fly   460 YSSELLNGHLVDSNGLIERVVKLGPIEDLRQLRDKHLYNIAPLRHKQGLQLYYDEEDTHSDEERL 524
            .|:|:|. |      :.|..:||. :||: ..|.:.||.          ||....|..|:.:|.|
  Rat   548 GSNEILK-H------INELTMKLS-VEDV-LTRAEALYR----------QLTACPELPHNVQEIL 593

  Fly   525 AVA 527
            .:|
  Rat   594 GLA 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 47/193 (24%)
DUF4682 560..689 CDD:464830
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Tbc1d17NP_001099728.1 PH_RBD 7..205 CDD:432305
TBC 308..543 CDD:214540 64/271 (24%)
Blue background indicates that the domain is not in the aligned region.

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