DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and SPOM_SPAC23D3.03C

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:NP_594541.1 Gene:SPOM_SPAC23D3.03C / 2541482 PomBaseID:SPAC23D3.03C Length:472 Species:Schizosaccharomyces pombe


Alignment Length:266 Identity:55/266 - (20%)
Similarity:100/266 - (37%) Gaps:54/266 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 WLHAMKLVARLPG----GTPPEFRRKLWLSLADKYLKSKNVDW---------AQQREKC------ 253
            |..|:| .:|..|    |.|...|.::|.......||   :|:         ||:||..      
pombe   199 WPDALK-SSRYAGIWRQGIPSRVRGRVWEKAIGNNLK---LDYQSFFNARANAQKREAAEKAEQM 259

  Fly   254 -FCEEWRED--DEELGIQIVKDLHRTGSNLCTGPAGSI--NQAKLKRILLG----YARYNPEVGY 309
             ...::|||  ..||.:|            .|.|..|:  .:..|:|.|:|    |:.|..:..|
pombe   260 NNANQFREDVCALELDLQ------------STMPHYSLFHTEGPLRRDLIGLLRAYSYYRFDTSY 312

  Fly   310 CQGFNMLGALILQVMDKEEEESMKVMIYLVEGVLPTGYFYGSMGGLQADMGVFRELMQTRLPRLA 374
            ..|.:.:|||:|  ::.....:...:..|::.......:......|::....|.:.::...|.||
pombe   313 IPGTSFIGALLL--LNMNLTSAFNCLANLLDKPFLQAVYTQDTSSLKSFYQTFLDTLKKNEPELA 375

  Fly   375 KHLQRLQGPVENAFEPPLTNVFTMQWFLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSL 439
            .||......|.:.|..||..        .:|...:......|:.|..:.|.....::..:.::.|
pombe   376 THLLIKLELVPDDFVYPLLR--------KLFIPMVSPEIASRILDCYVFEEDSFFIQLLMAVFKL 432

  Fly   440 LEERVI 445
            |:.:::
pombe   433 LKPKLL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 34/180 (19%)
DUF4682 560..689 CDD:464830
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
SPOM_SPAC23D3.03CNP_594541.1 COG5210 6..470 CDD:227535 55/266 (21%)
Blue background indicates that the domain is not in the aligned region.

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