DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42795 and Tbc1d4

DIOPT Version :10

Sequence 1:NP_001287272.1 Gene:CG42795 / 41252 FlyBaseID:FBgn0261928 Length:3213 Species:Drosophila melanogaster
Sequence 2:XP_006518822.1 Gene:Tbc1d4 / 210789 MGIID:2429660 Length:1307 Species:Mus musculus


Alignment Length:377 Identity:91/377 - (24%)
Similarity:159/377 - (42%) Gaps:83/377 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 LPGGTPPEFRRKLWLSLADKY-LKSKNVDWAQQREKCFCEEWREDDEELGIQ---IVKDLHRTGS 278
            |..|.|...|.::|..||.:| |:.:..:..|..:    ..::|..::|..|   |:.||.||  
Mouse   924 LKEGVPKSRRGEIWQFLALQYRLRHRLPNKHQPPD----TSYKELLKQLTAQQHAILVDLGRT-- 982

  Fly   279 NLCTGPAGSI----NQAKLKRILLGYARYNPEVGYCQGFNML-GALILQVMDKEEEESMKVMIYL 338
             ..|.|..|:    .|..|..:|..|:..:.|||||||.:.: |.|:|.:.:::..|.:|.::| 
Mouse   983 -FPTHPYFSVQLGAGQLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMY- 1045

  Fly   339 VEGVLPTGY---FYGSMGGLQADMGVFRELMQTRLPRLAKHLQRLQGPVENAFEPPLTNVFTMQW 400
                 ..|:   :...|..||..|.....|:......|..||:      ||...|.|   :...|
Mouse  1046 -----DLGFRKQYRPDMMSLQIQMYQLSRLLHDYHRELYNHLE------ENEISPSL---YAAPW 1096

  Fly   401 FLTMFCTCLPMSCVLRVWDLVLIEGSDVLLRTALVLWSLLEERVISVRSADEFYGKMGSYSSELL 465
            |||:|.:..|:..|.||:|::.::|::|:.:.||.|.|..|..::...:.:...        |.|
Mouse  1097 FLTLFASQFPLGFVARVFDIIFLQGTEVIFKVALSLLSSQEALIMECENFENIV--------EFL 1153

  Fly   466 NGHLVDSNGL-IERVV-KLGPIEDLRQLRDKHLYNIAPLRHKQGLQLYYDE--EDTHSDEERLAV 526
            ...|.|.|.. :|::: ::..::..:||   |.|.:.       ..:..||  |.:::.|:.   
Mouse  1154 KSTLPDMNTTEMEKIITQVFEMDISKQL---HAYEVE-------YHVLQDELLESSYACEDN--- 1205

  Fly   527 ATVFGLNWGRRGSVGPAAAGKQQVEQKDRLALDISLLKKQYDRLRERQKQAH 578
                                    |..::|....:.||:|...|.|:.:.||
Mouse  1206 ------------------------ESLEKLERANNQLKRQNMDLLEKLQVAH 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42795NP_001287272.1 RabGAP-TBC 268..443 CDD:459855 56/185 (30%)
DUF4682 560..689 CDD:464830 7/19 (37%)
PTZ00121 <1112..2009 CDD:173412
PTZ00121 <1740..2340 CDD:173412
PTZ00449 <2270..2610 CDD:185628
Tbc1d4XP_006518822.1 PTB 31..190 CDD:214675
PTB_TBC1D1_like 193..444 CDD:269967
DUF3350 809..872 CDD:463365
TBC 927..1141 CDD:214540 67/235 (29%)
PTZ00440 <1141..>1272 CDD:240419 23/138 (17%)
Blue background indicates that the domain is not in the aligned region.

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