DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12817 and Mcfd2

DIOPT Version :9

Sequence 1:NP_001036701.1 Gene:CG12817 / 41250 FlyBaseID:FBgn0037798 Length:171 Species:Drosophila melanogaster
Sequence 2:NP_640346.2 Gene:Mcfd2 / 246117 RGDID:628690 Length:145 Species:Rattus norvegicus


Alignment Length:151 Identity:43/151 - (28%)
Similarity:65/151 - (43%) Gaps:28/151 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ATLAVKRGP-----------------HHPRG---ETRRVDQHLTHEEHRIDDDLKDMGVQANLDD 70
            |:|.:.|||                 .|..|   .:..:|:...|::..|.:.|:.:..|... :
  Rat     2 ASLQLLRGPFLCVLLWAFCVPGARAQEHGAGVHYGSVGLDKSTVHDQEHIMEHLEGVINQPEA-E 65

  Fly    71 LSEEEKIFYMFKAHDNDNNNALDGLEMIQSAMHHNYDYFKNNERDAYLQNATDELEHFIEAIDKF 135
            :|.:|...:.||.||.|.|:.|||||:..:..|    ..|....:.....:.|||   |..||..
  Rat    66 MSPQELQLHYFKMHDYDGNSLLDGLELSTAITH----VHKEEGSEQVPPMSEDEL---ISIIDGV 123

  Fly   136 LLIADDNNDGLLHYPEFVKAI 156
            |...|.||||.:.|.||.|::
  Rat   124 LRDDDKNNDGYIDYAEFAKSL 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12817NP_001036701.1 EF-hand_7 77..156 CDD:290234 29/78 (37%)
Mcfd2NP_640346.2 EF-hand_7 76..142 CDD:404394 28/72 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 53 1.000 Inparanoid score I5355
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1601131at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.970

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