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Protein Alignment CG12817 and Cgref1
DIOPT Version :9
Sequence 1: | NP_001036701.1 |
Gene: | CG12817 / 41250 |
FlyBaseID: | FBgn0037798 |
Length: | 171 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_620787.2 |
Gene: | Cgref1 / 245918 |
RGDID: | 620801 |
Length: | 326 |
Species: | Rattus norvegicus |
Alignment Length: | 142 |
Identity: | 36/142 - (25%) |
Similarity: | 59/142 - (41%) |
Gaps: | 30/142 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 28 LAVKRGPHHPRGETRRVD----QHLT--------HEEHRIDDDLKDM-GVQANLDDLSEEEKIFY 79
|.:..|...|:....|:| |.|| .:..|:.|.||.: .::.:.:.::.|:.:.|
Rat 59 LLLPLGQAAPKDGVARLDPEAQQQLTTNPFQPGPEQLRRLRDYLKGLEKMEEDPEQMNREQVLLY 123
Fly 80 MFKAHDNDNNNALDGLE---MIQSAMHHNYDYFKNNERDAYLQNATDELEHFIEAIDKFLLIADD 141
:|..||.|.|..||||| |:.:|:.....:|..|. .|..:|..|...|.
Rat 124 LFALHDFDQNGQLDGLELLSMLTAALAPGAAHFPINP--------------VILVVDMVLETQDL 174
Fly 142 NNDGLLHYPEFV 153
:.|||:...|.:
Rat 175 DGDGLMTPAELI 186
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166341450 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
3 | 2.800 |
|
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