DRSC/TRiP Functional Genomics Resources

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Protein Alignment Timp and Timp

DIOPT Version :10

Sequence 1:NP_731461.1 Gene:Timp / 41248 FlyBaseID:FBgn0025879 Length:210 Species:Drosophila melanogaster
Sequence 2:XP_001231186.3 Gene:Timp / 4577142 VectorBaseID:AGAMI1_014873 Length:214 Species:Anopheles gambiae


Alignment Length:205 Identity:72/205 - (35%)
Similarity:113/205 - (55%) Gaps:8/205 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLTLLLVAV-FAFYGRP-ADACSCMPSHPQTHFAQADYVVQLRVLRKSDTIEPGRTTYKVHIKRT 71
            ||.|||..| .|....| |:.|||:|.||||.|..:.||:..:||||:.:.......||:.:|:.
Mosquito     6 LLPLLLTIVGLAMVMLPTAETCSCLPQHPQTAFCDSQYVIVAQVLRKTASKNEAMDAYKIAVKKE 70

  Fly    72 YKATSEARRMLRDGRLSTPQDDAMCGINLDLGKVYIVAGRMPTLNICSYYKEYTRMTITERHGFS 136
            ||.:.|||::|..|:|.|...|:.|||.|....:|.:|.....:.:|.:.:.|..:::.|:.|.:
Mosquito    71 YKMSDEARQLLNHGKLYTSTMDSTCGIKLKPSTLYAIAANSEQVGLCDFIRPYDELSLVEKRGLA 135

  Fly   137 GGYAKATNCTVTPCFGERCFKGRNYADTCKWSPF---GKCETNYSACMPHKVQTVNGVISRCRWR 198
            |.|.|...|.:..|:.::|   .....:|.|:||   |.|||:|.:|:|..|...||...:|.||
Mosquito   136 GVYRKGCKCKINHCWDDKC---HQRLGSCNWTPFAPKGICETSYGSCVPAGVTKKNGAPIKCHWR 197

  Fly   199 RTQLYRKCMS 208
            |:..:.:|::
Mosquito   198 RSPRFGQCVA 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TimpNP_731461.1 NTR_TIMP_like 28..141 CDD:239632 40/112 (36%)
TimpXP_001231186.3 None

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