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Protein Alignment Timp and Timp2

DIOPT Version :9

Sequence 1:	NP_731461.1	Gene:	Timp / 41248	FlyBaseID:	FBgn0025879	Length:	210	Species:	Drosophila melanogaster
Sequence 2:	NP_068824.1	Gene:	Timp2 / 29543	RGDID:	61312	Length:	220	Species:	Rattus norvegicus

Alignment Length:	219	Identity:	57/219 - (26%)
Similarity:	94/219 - (42%)	Gaps:	43/219 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 LRKHLGLLTLLLVAVFAFYGRPADACSCMPSHPQTHFAQADYVVQLRVLRKSDTIEPGRTTYKVH 67
            ||..||||.|..:.      ||||||||.|.|||..|..||.|::.:.:.:.: ::.|...|...
  Rat     8 LRLALGLLLLATLL------RPADACSCSPVHPQQAFCNADVVIRAKAVSEKE-VDSGNDIYGNP 65

  Fly    68 IKRTYKATSEARRMLRDGR----LSTPQDDAMCGINLDLG--KVYIVAGRMP-----TLNICSYY 121
            |||......:.:......:    :.|....|:||::||:|  |.|::||:..     .:.:|.:.
  Rat    66 IKRIQYEIKQIKMFKGPDKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFI 130

  Fly   122 KEYTRMTITERHGFSGGY-----AKATNCTVTPCFGERCFKGRNYADTCKW------SPFGKCET 175
            ..:..::||::...:..|     .|.|.|.:.||:       .:..|.|.|      ......:.
  Rat   131 VPWDTLSITQKKSLNHRYQMGCECKITRCPMIPCY-------ISSPDECLWMDWVTEKSINGHQA 188

  Fly   176 NYSACMPHKVQTVNGVISRCRWRR 199
            .:.||    ::..:|   .|.|.|
  Rat   189 KFFAC----IKRSDG---SCAWYR 205

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.