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Protein Alignment Timp and Timp3

DIOPT Version :9

Sequence 1:	NP_731461.1	Gene:	Timp / 41248	FlyBaseID:	FBgn0025879	Length:	210	Species:	Drosophila melanogaster
Sequence 2:	NP_037018.2	Gene:	Timp3 / 25358	RGDID:	3865	Length:	211	Species:	Rattus norvegicus

Alignment Length:	208	Identity:	58/208 - (27%)
Similarity:	97/208 - (46%)	Gaps:	31/208 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 LGLLTLLLVAVFAFYGRPADACSCMPSHPQTHFAQADYVVQLRVLRKSDTIEP--GRTTYKVHIK 69
            |||:.||.......:|  .:||:|.|||||..|..:|.|::.:|:.|....|.  |...|.:...
  Rat     5 LGLVLLLSCWSLGHWG--TEACTCSPSHPQDAFCNSDIVIRAKVVGKKLVKEGPFGTLVYTIKQM 67

  Fly    70 RTYKATSEARRMLRDGRLSTPQDDAMCGINLDLGKV-YIVAGR-----MPTLNICSYYKEYTRMT 128
            :.|:..|   :|.....:.|...:::||:.|::.|. |::.||     |.| .:|::.:.:..:|
  Rat    68 KMYRGFS---KMPHVQYIHTEASESLCGLKLEVNKYQYLLTGRVYEGKMYT-GLCNFVERWDHLT 128

  Fly   129 ITERHGFSGGYAKATNCTVTPCFGERCF-KGRNYADTCKW----SPFG--KCETNYSACMPHKVQ 186
            :::|.|.:..|....||.:..|:...|| ..:|   .|.|    |.||  ..::.:.||:..|
  Rat   129 LSQRKGLNYRYHLGCNCKIKSCYYLPCFVTSKN---ECLWTDMLSNFGYPGYQSKHYACIRQK-- 188

  Fly   187 TVNGVISRCRWRR 199
              .|.   |.|.|
  Rat   189 --GGY---CSWYR 196

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.