DRSC/TRiP Functional Genomics Resources

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Protein Alignment Timp and cri-2

DIOPT Version :10

Sequence 1:NP_731461.1 Gene:Timp / 41248 FlyBaseID:FBgn0025879 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_505113.1 Gene:cri-2 / 179197 WormBaseID:WBGene00019478 Length:158 Species:Caenorhabditis elegans


Alignment Length:120 Identity:27/120 - (22%)
Similarity:48/120 - (40%) Gaps:19/120 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLRKHLGLLTLLLVAVFAFYGRPADACSCMPSHPQTHFAQADYV----VQLRVLRK-----SDTI 57
            :|...|.:|::|:....        ||.|.....:..|..|.:|    |::||.::     |:..
 Worm     3 NLSLSLVILSVLIAVTL--------ACKCREQSTKESFCNAHWVSHVKVKVRVGKQGLPEGSERK 59

  Fly    58 EPGRTTYKVHIKRTYKATSEARRMLRDGRLSTPQDDAMCGINLDLGKVYIVAGRM 112
            ......|.|.....:|..|....:  ...:.||.:...||:.:..|..|::|||:
 Worm    60 GLNNLRYTVQHVEVFKKPSNMTTL--PDEIFTPSEAPACGLKIAAGHEYLLAGRV 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TimpNP_731461.1 NTR_TIMP_like 28..141 CDD:239632 22/94 (23%)
cri-2NP_505113.1 NTR_TIMP_like 21..149 CDD:239632 22/94 (23%)

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