DRSC/TRiP Functional Genomics Resources

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Protein Alignment Timp and LOC101885062

DIOPT Version :10

Sequence 1:NP_731461.1 Gene:Timp / 41248 FlyBaseID:FBgn0025879 Length:210 Species:Drosophila melanogaster
Sequence 2:XP_073802896.1 Gene:LOC101885062 / 101885062 -ID:- Length:226 Species:Danio rerio


Alignment Length:200 Identity:50/200 - (25%)
Similarity:86/200 - (43%) Gaps:25/200 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLVAVFAFYGRPADACSCMPSHPQTHFAQADYVVQLRVLRKS--DTIEPGRTTYKVHIKRTYKAT 75
            ||..:.......||||||..||||..:..:|.|::.:|:.|.  |....|...|.|...:.||..
Zfish    24 LLFCLLCVMEERADACSCAISHPQDAYCHSDIVIRAKVVGKKLLDDGPFGTLRYTVKQMKMYKGF 88

  Fly    76 SEARRMLRDGRLSTPQDDAMCGINLDLGKV-YIVAGRMPT----LNICSYYKEYTRMTITERHGF 135
            .:.:.:   ..:.|...::|||:..|:.|. |::.||:..    ..:|::.:.:..:::.::.|.
Zfish    89 EKIQHV---QYVYTHDSESMCGVKFDINKYQYLITGRVHDGRLYTGLCNFNRRWEHLSLAQKKGI 150

  Fly   136 SGGYAKATNCTVTPCFGERCFKGRNYADTCKW----SPFG--KCETNYSACMPHKVQTVNGVISR 194
            :..|....:|.:.||....||.  .....|.|    |.||  ..::.:.||:..|.       ..
Zfish   151 NHRYQLGCSCRIKPCHTLPCFV--TSKSECLWTDMLSHFGYPGYQSRHYACIQQKE-------GY 206

  Fly   195 CRWRR 199
            |.|.|
Zfish   207 CSWYR 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TimpNP_731461.1 NTR_TIMP_like 28..141 CDD:239632 29/119 (24%)
LOC101885062XP_073802896.1 None

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