DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syn and Syn

DIOPT Version :10

Sequence 1:NP_731459.2 Gene:Syn / 41247 FlyBaseID:FBgn0004575 Length:1041 Species:Drosophila melanogaster
Sequence 2:XP_061504187.1 Gene:Syn / 4577141 VectorBaseID:AGAMI1_013507 Length:553 Species:Anopheles gambiae


Alignment Length:570 Identity:394/570 - (69%)
Similarity:455/570 - (79%) Gaps:47/570 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 GGPPNMPPPPAPGQ----------PAGAA-----PELSLSFGAGKTPATAAPAPPRGVSAPTSPA 105
            |||||:|||||||.          |.|:|     ||||||||.|       || .||.|||:|||
Mosquito     3 GGPPNIPPPPAPGTAGSVSPGGPVPPGSAPPTGGPELSLSFGKG-------PA-QRGTSAPSSPA 59

  Fly   106 KSRESLLQRVQSLTGAARDQGASILGAAVQSATQRAPAFSKDKYFTLLVLDDQNTDWSKYFRGRR 170
            ||||||||||||||||||||||||:||||.:|::..| |::||.|||||:|||||||||||||:|
Mosquito    60 KSRESLLQRVQSLTGAARDQGASIIGAAVSTASRVQP-FNRDKCFTLLVVDDQNTDWSKYFRGKR 123

  Fly   171 LHGDFDIRVEQAEFRDITVVSSADTGPVVTMAAYRSGTRVARSFRPDFVLIRQPPRDGSSDYRST 235
            ||.|:||||||||||:|.:.:|||:||:|  ...|.|::.|:.|||||:|:||||||||.|||||
Mosquito   124 LHSDYDIRVEQAEFREIMLTASADSGPMV--GCNRGGSKQAKPFRPDFILVRQPPRDGSKDYRST 186

  Fly   236 ILGLKYGGVPSINSLHSIYQFQDKPWVFSHLLQLQRRLGRDGFPLIEQTFFPNPRDLFQFTKFPS 300
            :||||||||||||||||:||||||||||:||||||||||||.|||:||||||||:|:|.:|:||.
Mosquito   187 LLGLKYGGVPSINSLHSLYQFQDKPWVFAHLLQLQRRLGRDAFPLVEQTFFPNPKDMFTWTRFPC 251

  Fly   301 VLKAGHCHGGVATARLENQSALQDAAGLVSGAG-NDSHCYCTIEPYIDAKFSVHIQKIGNNYKAF 364
            ||||||||||.|||:|:|..||||||||:.|.| :|:..||::||||||||.|||||||.:||||
Mosquito   252 VLKAGHCHGGKATAKLDNPGALQDAAGLLCGTGLSDNGSYCSLEPYIDAKFDVHIQKIGTSYKAF 316

  Fly   365 MRKSITGNWKTNQGSAMLEQITLTEKYKSWVDEISELFGGMEVCGLSVVVAKDGREYIISACDST 429
            |||||:|||||||||||||||.:|||||:||||:|||||||||||::|:|:|:|:|:||||.|||
Mosquito   317 MRKSISGNWKTNQGSAMLEQIPMTEKYKTWVDEVSELFGGMEVCGVAVIVSKEGKEFIISAADST 381

  Fly   430 FALIGDTQEEDRRQIADLVSGRMQNVCRPSMAQTGPGKLPSRSSVSSRAESPTDEGVAPTPPLPA 494
            |.|:|||||||||||||||.|||||||||||..    |..||||:|||..|||::    .||:|.
Mosquito   382 FPLMGDTQEEDRRQIADLVVGRMQNVCRPSMMT----KAVSRSSISSRGTSPTED----APPVPI 438

  Fly   495 GPRPAPM-GGPPPIPERTSPAVGSIGRLSSRSSIS-EVPEEPSSSGPSTVGGVRRDSQTSQSSTI 557
            |.||.|: ||||||||||:|.||||||..|.||.| |.||:||...|:.....|||||.||||::
Mosquito   439 GTRPVPVGGGPPPIPERTTPGVGSIGRHGSFSSQSGEPPEQPSERAPTLNSVGRRDSQASQSSSV 503

  Fly   558 S--SSVSRA----GQRPPQTQN----SVVEDAEDTMKNLRKTFAGIFGDM 597
            |  ||.|.|    |:.|.....    ||||||||||||||||||||||||
Mosquito   504 SGVSSASAARSGVGKVPAAGAGPGGPSVVEDAEDTMKNLRKTFAGIFGDM 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynNP_731459.2 Synapsin 150..246 CDD:460438 69/95 (73%)
CPSase_L_D2 248..452 CDD:473076 160/204 (78%)
PHA03307 425..>700 CDD:223039 117/185 (63%)
SynXP_061504187.1 None

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