DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6254 and AT3G60580

DIOPT Version :9

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_191617.1 Gene:AT3G60580 / 825229 AraportID:AT3G60580 Length:288 Species:Arabidopsis thaliana


Alignment Length:359 Identity:71/359 - (19%)
Similarity:116/359 - (32%) Gaps:135/359 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 YKCNICKKPYKKPKA----YKRHMEEVHNTVADDLPQLECNQCKLCFPTVAQLHAHHRTHVRAKP 389
            |||.:|.|.:...||    .:.||...|        :.|....:|.:.|.:.:.:       :.|
plant     4 YKCRVCFKSFVNGKALGGHMRSHMSNSH--------EEEQRPSQLSYETESDVSS-------SDP 53

  Fly   390 KTDNCCPHCEKRFTTSGTL---KRHIEGIHNQIKPYVCDLCGKSF-------NYIT-GLKDHKLV 443
            |.         .||:|..|   :...|...|     |.:|..|..       :::| .:|..:|.
plant    54 KF---------AFTSSVLLEDGESESESSRN-----VINLTRKRSKRTRKLDSFVTKKVKTSQLG 104

  Fly   444 HTDECPFECPVCKRGFKNNARLKIHLDTHSAEIYECTVCGLKLKTRRTFNK-------------- 494
            :..|...|.|.....           ||.:.|  :...| |.:.:|..:.|              
plant   105 YKPESDQEPPHSSAS-----------DTTTEE--DLAFC-LMMLSRDKWKKNKSNKEVVEEIETE 155

  Fly   495 ------HKLVHSDTR-QFKCEVCGSAFKRSKTLKAHLILH-----------------------TG 529
                  :|:..:.|: ::|||.||..||..:.|..|...|                       ..
plant   156 EESEGYNKINRATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVA 220

  Fly   530 IRPYKCNFCGRDFANGSNCRSHKRQAHPKELAEEEARGVTR--STLLPMLDELTIASKLLKTPAG 592
            .|.::|..|.|.||:|.....|||......|:..:.|.|.|  |....|:|        |..|| 
plant   221 KRIHECPICLRVFASGQALGGHKRSHGVGNLSVNQQRRVHRNESVKQRMID--------LNLPA- 276

  Fly   593 PCKVKGSRPKAAPKDQDNGNESPTKDTDGAILYE 626
                                  ||::.:.:::::
plant   277 ----------------------PTEEDEVSVVFQ 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:285071
COG5048 <353..554 CDD:227381 48/255 (19%)
C2H2 Zn finger 364..384 CDD:275368 2/19 (11%)
C2H2 Zn finger 395..416 CDD:275368 5/23 (22%)
C2H2 Zn finger 424..444 CDD:275368 5/27 (19%)
C2H2 Zn finger 452..472 CDD:275368 2/19 (11%)
C2H2 Zn finger 479..499 CDD:275368 5/39 (13%)
C2H2 Zn finger 507..527 CDD:275368 8/19 (42%)
zf-H2C2_2 520..544 CDD:290200 8/46 (17%)
C2H2 Zn finger 535..553 CDD:275368 7/17 (41%)
AT3G60580NP_191617.1 zf-C2H2_6 4..28 CDD:290623 8/23 (35%)
zf-C2H2_6 172..197 CDD:290623 10/24 (42%)
zf-C2H2_6 223..246 CDD:290623 9/22 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I2552
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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