DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6254 and LOC568955

DIOPT Version :9

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_697406.4 Gene:LOC568955 / 568955 -ID:- Length:541 Species:Danio rerio


Alignment Length:563 Identity:114/563 - (20%)
Similarity:183/563 - (32%) Gaps:199/563 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 QEKQDFPKEEDVIEEEMQISGVEEE-ILEEDV----EEDLAEEEVETV--EEEIDTVGEEVE--- 232
            :.||..|:...:..|:...:|.:|. :||.|.    |....|.:...|  |.:.|:|..::.   
Zfish     3 RRKQSNPQPVKLGAEDGVAAGNKESLVLESDFLLGQELGFGENDYRIVGFERDSDSVAADMGMPV 67

  Fly   233 --------------AVEEELETQDATDCLVEEVEHMTEDRYI------EESQIIEESQVSDFNME 277
                          .:|.:.|  |..|...|..|...|..:.      :..|::.:.....:.::
Zfish    68 YGFSDEDCSSYNRLGIESDFE--DPRDTESEREEMAPEAAFAPYLSCRQCGQLLGDPLSGLYCLQ 130

  Fly   278 TYEIVQHNPQKEPVETKD-TVESI---ESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPY 338
            ..|..:.:...||....| |:|::   .|:.:|.:..|                   |.:|....
Zfish   131 CGETDRQDRSLEPTHPADNTLENLNHSRSDGNTSKTFS-------------------CKLCSFSS 176

  Fly   339 KKPKAYKRHMEEVHNTVADDLPQLECNQCKLCFPTVAQLHAHHRTHVRAKP-KTDNC-------- 394
            :.....|||| :.||   .:.| .:|..|......:..|..|.|||...|| |...|        
Zfish   177 RYSNHLKRHM-KTHN---GEKP-YQCPHCVYASAQLVNLQRHVRTHTGEKPYKCQFCTFACNSLG 236

  Fly   395 ----------------CPHCEKRFTTSGTLKRHIEG----------------------------- 414
                            |.||:.|.:.|.:||:|.:.                             
Zfish   237 NLKRHQRMHTQEKELSCAHCDFRASNSHSLKKHTKSHKEDKTTALTEESVVSDLTLHISSDPDFL 301

  Fly   415 --------------------IHNQ------------IKPYVCDLCG------------------- 428
                                :||:            :.|:.|.:||                   
Zfish   302 QNYDHHHNHHLPSHLPPPALLHNEGLSGESDPLPELLFPFSCRVCGAVLDDEEATAPQICSKCTL 366

  Fly   429 ------------KSF---------NYITGLKDHKLVHTDECPFECPVCKRGFKNNARLKIHLDTH 472
                        |.|         .|...|..|...|:.|.|::||.|.....:...||.|...|
Zfish   367 DMLSKSSPDKDDKLFPCTSCPFVTQYPNHLARHMKTHSGEKPYKCPQCSYASAHFDNLKRHHRVH 431

  Fly   473 SAE-IYECTVCGLKLKTRRTFNKHKLVHSDTRQFKCEVCGSAFKRSKTLKAHLILHTGIRPYKCN 536
            :.| .|:|.||...........:|:.:||.::.|:|.||..:..:|..||.|::.|||.:|:||.
Zfish   432 TGEKPYKCRVCDYACGNLANLKRHERIHSGSKPFQCSVCSYSCNQSMNLKRHMLRHTGEKPFKCQ 496

  Fly   537 FCGRDFANGSNCRSH-KRQAH-----------PKELAEEEARG 567
            .||....:..|.:.| |:..|           |::..|||..|
Zfish   497 HCGYTTGHWDNYKRHQKKHGHAGGEGWIKMQLPEKEDEEEEEG 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:285071
COG5048 <353..554 CDD:227381 69/328 (21%)
C2H2 Zn finger 364..384 CDD:275368 5/19 (26%)
C2H2 Zn finger 395..416 CDD:275368 8/69 (12%)
C2H2 Zn finger 424..444 CDD:275368 8/59 (14%)
C2H2 Zn finger 452..472 CDD:275368 6/19 (32%)
C2H2 Zn finger 479..499 CDD:275368 4/19 (21%)
C2H2 Zn finger 507..527 CDD:275368 7/19 (37%)
zf-H2C2_2 520..544 CDD:290200 11/23 (48%)
C2H2 Zn finger 535..553 CDD:275368 5/18 (28%)
LOC568955XP_697406.4 C2H2 Zn finger 169..189 CDD:275368 6/20 (30%)
zf-H2C2_2 181..206 CDD:290200 9/29 (31%)
COG5048 193..>467 CDD:227381 50/274 (18%)
C2H2 Zn finger 197..217 CDD:275368 5/19 (26%)
zf-H2C2_2 209..234 CDD:290200 9/24 (38%)
C2H2 Zn finger 225..245 CDD:275368 1/19 (5%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
C2H2 Zn finger 383..403 CDD:275368 3/19 (16%)
zf-H2C2_2 395..420 CDD:290200 8/24 (33%)
C2H2 Zn finger 411..431 CDD:275368 6/19 (32%)
zf-H2C2_2 423..446 CDD:290200 9/22 (41%)
C2H2 Zn finger 439..459 CDD:275368 4/19 (21%)
zf-H2C2_2 451..476 CDD:290200 7/24 (29%)
C2H2 Zn finger 467..487 CDD:275368 7/19 (37%)
zf-H2C2_2 479..502 CDD:290200 11/22 (50%)
C2H2 Zn finger 495..515 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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