DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6254 and si:dkey-154p10.3

DIOPT Version :10

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_692110.2 Gene:si:dkey-154p10.3 / 563659 ZFINID:ZDB-GENE-070912-380 Length:646 Species:Danio rerio


Alignment Length:559 Identity:115/559 - (20%)
Similarity:199/559 - (35%) Gaps:180/559 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 VCQTETSSKMKSEILMIPNFLVEKQ----------CLQEKQDFPKEEDVIEEEMQISGVEEEILE 205
            :||..:|.|.|     |.:.::|:.          || ||:|    |:.:..||:::. |||:..
Zfish    55 ICQFTSSHKAK-----ISHHVMERHDPVSPCPHLPCL-EKED----EESLCVEMRVND-EEEVEH 108

  Fly   206 E----DVEEDLAEEEVETVEEEIDT------------------------VGE------------E 230
            .    |:|.|| :...::.|:::|.                        :|.            |
Zfish   109 NSSPYDLESDL-QSGSKSNEDQMDMERISFLLPMYGMFQNISPRSCDIGLGSSSDGNLHVAQTCE 172

  Fly   231 VEAVEEELETQDATDCLVEEVEHMTEDRYIE---------ESQIIEESQVSDFNMETYEIVQHNP 286
            |..:.||....|.:|   ||.....||...:         ::::.:|......::.|..:.:.:.
Zfish   173 VSTLFEEDRHDDNSD---EERVFQLEDASTDLTVPLNSGMDTEVQDEEMAQSAHLMTLGLCRISS 234

  Fly   287 QKEPVETKDTVESIESNEDTQEDISREHVTD--EED----------------------------- 320
            .|....:..:.:|:...|....|.|.:.|..  |||                             
Zfish   235 TKGQPSSATSAKSLPEGEQDAGDASMDAVMQKTEEDGGLACILCQTVASSRVMLDVHLKCHSGEQ 299

  Fly   321 ---------EISEVPAM---------------YKCNICKKPYKKPKA----YKRHMEEVHNTVAD 357
                     |..|...|               ::|::|.:.:::..:    .:||..:.|:..::
Zfish   300 GFRCPRCGWESEEWADMEHHWRLHGKRKGTKRHRCSVCPRSFRRADSRDAHEERHNHQRHHRRSE 364

  Fly   358 DLPQLECNQCKLCFPTVAQLHAHHRTHVRAKPKTDNCCPHCE-KRFTTSGTLKRHIEGIHNQIKP 421
            ....::|:.|.....:..:...|...||:...|    |.||: |..|...||| ||...|.|.: 
Zfish   365 SGEPVQCSFCLEWCHSGKEWEIHQHCHVQGGFK----CLHCDFKEKTWKKTLK-HIHTQHKQAE- 423

  Fly   422 YVCDLCGKSFNYITGLKD-HKLVHTDECPFEC----------PVCKRGFKNNA------------ 463
                  ....|.|...:| .:|..:.:.| ||          .:.|:..||.|            
Zfish   424 ------ANQDNQIAHSRDIQQLSSSAKYP-ECLRRMQPELWSQIRKKKVKNRAVGKEKSNEGGKD 481

  Fly   464 RLKIHLDTHSA--------EIYECTVCGLKLKTRRTFNKHKLVHSDTRQFKCEVCGSAFKRSKTL 520
            |:| ||...::        :.:.|.:|..|..|:.|..:|..:|...:.|||..|....:...:|
Zfish   482 RVK-HLKAETSVGLTVTRRKEFCCNLCDKKFSTKLTMRRHMGIHQGDKPFKCPHCHYCTRLKASL 545

  Fly   521 KAHLILHTGIRPYKCNFCGRDFANGSNCRSHKRQAHPKE 559
            ..||.:|||.:||||..|.....:.|:.|.|.| .|.:|
Zfish   546 IQHLRIHTGEKPYKCLQCSYASIDRSSLRRHSR-THTQE 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:462262
COG5048 <353..554 CDD:227381 58/232 (25%)
C2H2 Zn finger 364..384 CDD:275368 3/19 (16%)
C2H2 Zn finger 395..416 CDD:275368 10/21 (48%)
C2H2 Zn finger 424..444 CDD:275368 4/20 (20%)
C2H2 Zn finger 452..472 CDD:275368 9/41 (22%)
C2H2 Zn finger 479..499 CDD:275368 6/19 (32%)
C2H2 Zn finger 507..527 CDD:275368 5/19 (26%)
C2H2 Zn finger 535..553 CDD:275368 5/17 (29%)
si:dkey-154p10.3XP_692110.2 C2H2 Zn finger 275..295 CDD:275368 0/19 (0%)
C2H2 Zn finger 303..323 CDD:275368 3/19 (16%)
C2H2 Zn finger 334..350 CDD:275368 2/15 (13%)
COG5048 <500..632 CDD:227381 28/85 (33%)
C2H2 Zn finger 504..524 CDD:275368 6/19 (32%)
C2H2 Zn finger 532..552 CDD:275368 5/19 (26%)
C2H2 Zn finger 560..580 CDD:275368 6/20 (30%)
C2H2 Zn finger 588..608 CDD:275368
C2H2 Zn finger 616..636 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.